Ginsburg Shoshana B, Viswanath Satish E, Bloch B Nicolas, Rofsky Neil M, Genega Elizabeth M, Lenkinski Robert E, Madabhushi Anant
Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
J Magn Reson Imaging. 2015 May;41(5):1383-93. doi: 10.1002/jmri.24676. Epub 2014 Jun 18.
To identify computer-extracted features for central gland and peripheral zone prostate cancer localization on multiparametric magnetic resonance imaging (MRI).
Preoperative T2-weighted (T2w), diffusion-weighted imaging (DWI), and dynamic contrast-enhanced (DCE) MRI were acquired from 23 men with confirmed prostate cancer. Following radical prostatectomy, the cancer extent was delineated by a pathologist on ex vivo histology and mapped to MRI by nonlinear registration of histology and corresponding MRI slices. In all, 244 computer-extracted features were extracted from MRI, and principal component analysis (PCA) was employed to reduce the data dimensionality so that a generalizable classifier could be constructed. A novel variable importance on projection (VIP) measure for PCA (PCA-VIP) was leveraged to identify computer-extracted MRI features that discriminate between cancer and normal prostate, and these features were used to construct classifiers for cancer localization.
Classifiers using features selected by PCA-VIP yielded an area under the curve (AUC) of 0.79 and 0.85 for peripheral zone and central gland tumors, respectively. For tumor localization in the central gland, T2w, DCE, and DWI MRI features contributed 71.6%, 18.1%, and 10.2%, respectively; for peripheral zone tumors T2w, DCE, and DWI MRI contributed 29.6%, 21.7%, and 48.7%, respectively.
PCA-VIP identified relatively stable subsets of MRI features that performed well in localizing prostate cancer on MRI.
确定在多参数磁共振成像(MRI)上用于中央腺体和外周带前列腺癌定位的计算机提取特征。
对23例确诊为前列腺癌的男性患者进行术前T2加权(T2w)、扩散加权成像(DWI)和动态对比增强(DCE)MRI检查。前列腺癌根治术后,由病理学家在离体组织学上描绘癌症范围,并通过组织学与相应MRI切片的非线性配准将其映射到MRI上。总共从MRI中提取了244个计算机提取特征,并采用主成分分析(PCA)来降低数据维度,以便构建一个可推广的分类器。利用一种新的PCA投影变量重要性(PCA-VIP)度量来识别区分癌症与正常前列腺的计算机提取MRI特征,并将这些特征用于构建癌症定位分类器。
使用PCA-VIP选择的特征构建的分类器,对外周带肿瘤和中央腺体肿瘤的曲线下面积(AUC)分别为0.79和0.85。对于中央腺体的肿瘤定位,T2w、DCE和DWI MRI特征分别贡献了71.6%、18.1%和10.2%;对于外周带肿瘤,T2w、DCE和DWI MRI分别贡献了29.6%、21.7%和48.7%。
PCA-VIP识别出了在MRI上对前列腺癌进行定位时表现良好的相对稳定的MRI特征子集。