INRA, UMR1083 Science pour l'Œnologie, 2 Place Viala, F-34060 Montpellier, France.
BMC Genomics. 2014 Jun 19;15(1):495. doi: 10.1186/1471-2164-15-495.
In conditions of nitrogen limitation, Saccharomyces cerevisiae strains differ in their fermentation capacities, due to differences in their nitrogen requirements. The mechanisms ensuring the maintenance of glycolytic flux in these conditions are unknown. We investigated the genetic basis of these differences, by studying quantitative trait loci (QTL) in a population of 133 individuals from the F2 segregant population generated from a cross between two strains with different nitrogen requirements for efficient fermentation.
By comparing two bulks of segregants with low and high nitrogen requirements, we detected four regions making a quantitative contribution to these traits. We identified four polymorphic genes, in three of these four regions, for which involvement in the phenotype was validated by hemizygote comparison. The functions of the four validated genes, GCN1, MDS3, ARG81 and BIO3, relate to key roles in nitrogen metabolism and signaling, helping to maintain fermentation performance.
This study reveals that differences in nitrogen requirement between yeast strains results from a complex allelic combination. The identification of three genes involved in sensing and signaling nitrogen and specially one from the TOR pathway as affecting nitrogen requirements suggests a role for this pathway in regulating the fermentation rate in starvation through unknown mechanisms linking nitrogen signaling to glycolytic flux.
在氮限制条件下,由于氮需求的差异,酿酒酵母菌株的发酵能力存在差异。目前尚不清楚确保这些条件下糖酵解通量维持的机制。我们通过研究来自两个氮需求不同的高效发酵菌株杂交产生的 F2 分离群体的 133 个个体的数量性状位点 (QTL),来研究这些差异的遗传基础。
通过比较对氮需求低和高的两个分离群体,我们检测到四个对这些性状有定量贡献的区域。我们在其中四个区域中鉴定出四个多态性基因,其中三个区域的基因参与表型的验证是通过半合子比较来完成的。四个经验证的基因(GCN1、MDS3、ARG81 和 BIO3)的功能与氮代谢和信号转导的关键作用有关,有助于维持发酵性能。
本研究表明,酵母菌株之间氮需求的差异源于复杂的等位基因组合。鉴定出三个参与氮感应和信号转导的基因,特别是一个参与 TOR 途径的基因,作为影响氮需求的因素,表明该途径通过将氮信号与糖酵解通量联系起来的未知机制,在通过饥饿调节发酵速率方面发挥作用。