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来自巴辛诺内斯芽孢杆菌的Xyn30D的结晶及初步X射线衍射分析

Crystallization and preliminary X-ray diffraction analysis of Xyn30D from Paenibacillus barcinonensis.

作者信息

Sainz-Polo María Ángela, Valenzuela Susana Valeria, Pastor F Javier, Sanz-Aparicio Julia

机构信息

Department of Crystallography and Structural Biology, Institute of Physical Chemistry `Rocasolano', Consejo Superior de Investigaciones Científicas, Serrano 119, 28006 Madrid, Spain.

Department of Microbiology, Faculty of Biology, Universitat de Barcelona, Avenida Diagonal 643, 08028 Barcelona, Spain.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Jul;70(Pt 7):963-6. doi: 10.1107/S2053230X14012035. Epub 2014 Jun 19.

Abstract

Xyn30D, a new member of a recently identified group of xylanases, has been purified and crystallized. Xyn30D is a bimodular enzyme composed of an N-terminal catalytic domain belonging to glycoside hydrolase family 30 (GH30) and a C-terminal family 35 carbohydrate-binding domain (CBM35) able to bind xylans and glucuronic acid. Xyn30D shares the characteristic endo mode of action described for GH30 xylanases, with the hydrolysis of the β-(1,4) bonds of xylan being directed by α-1,2-linked glucuronate moieties, which have to be placed at the -2 subsite of the xylanase active site. Crystals of the complete enzyme were obtained and a full data set to 2.3 Å resolution was collected using a synchrotron X-ray source. This represents the first bimodular enzyme with the domain architecture GH30-CBM35. This study will contribute to the understanding of the role that the different xylanases play in the depolymerization of glucuronoxylan.

摘要

Xyn30D是最近鉴定出的一组木聚糖酶中的新成员,已被纯化并结晶。Xyn30D是一种双模块酶,由属于糖苷水解酶家族30(GH30)的N端催化结构域和能够结合木聚糖和葡萄糖醛酸的C端35家族碳水化合物结合结构域(CBM35)组成。Xyn30D具有GH30木聚糖酶所描述的典型内切作用模式,木聚糖β-(1,4)键的水解由α-1,2-连接的葡萄糖醛酸部分引导,这些部分必须位于木聚糖酶活性位点的-2亚位点。获得了完整酶的晶体,并使用同步加速器X射线源收集了分辨率为2.3 Å的完整数据集。这是首个具有GH30-CBM35结构域架构的双模块酶。这项研究将有助于理解不同木聚糖酶在葡糖醛酸木聚糖解聚中所起的作用。

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