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通过超深度测序揭示百岁老人线粒体DNA异质性向其后代的传递。

Transmission from centenarians to their offspring of mtDNA heteroplasmy revealed by ultra-deep sequencing.

作者信息

Giuliani Cristina, Barbieri Chiara, Li Mingkun, Bucci Laura, Monti Daniela, Passarino Giuseppe, Luiselli Donata, Franceschi Claudio, Stoneking Mark, Garagnani Paolo

机构信息

Department of Biological, Geological and Environmental Sciences, Laboratory of Molecular Anthropology and Centre for Genome Biology, University of Bologna, Bologna, Italy.

出版信息

Aging (Albany NY). 2014 Jun;6(6):454-67. doi: 10.18632/aging.100661.

Abstract

The role that mtDNA heteroplasmy plays in healthy aging, familial longevity and the heritability patterns of low levels heteroplasmy in the elderly are largely unknown. We analyzed the low levels of mtDNA heteroplasmy in blood in a cohort of centenarians, their offspring and a group of offspring of non long‐lived parents, characterized by a less favorable health phenotype. The aims of this study are to: (i) investigate the transmission of low level heteroplasmies in the elderly; (ii) explore the association of heteroplasmy with age and longevity and (iii) investigate heteroplasmy patterns in these three groups. We sequenced a 853 bp mtDNA fragment in 88 individuals to an average coverage of 49334‐fold, using quality control filtering and triplicate PCR analysis to reduce any methodological bias, and we detected 119 heteroplasmic positions with a minor allele frequency≥0.2%. The results indicate that low‐level heteroplasmies are transmitted and maintained within families until extreme age. We did not find any heteroplasmic variant associated with longevity and healthy aging but we identified an unique heteroplasmy profile for each family, based on total level and positions. This familial profile suggests that heteroplasmy may contribute to familial longevity.

摘要

线粒体DNA异质性在健康衰老、家族长寿以及老年人低水平异质性的遗传模式中所起的作用在很大程度上尚不清楚。我们分析了一组百岁老人、他们的后代以及一组健康表型较差的非长寿父母的后代血液中线粒体DNA的低水平异质性。本研究的目的是:(i)调查老年人中低水平异质性的传递情况;(ii)探索异质性与年龄和长寿的关联;(iii)研究这三组人群中的异质性模式。我们对88名个体的一个853 bp线粒体DNA片段进行了测序,平均覆盖深度达49334倍,采用质量控制筛选和三次重复PCR分析以减少任何方法学偏差,并且我们检测到了119个次要等位基因频率≥0.2%的异质位点。结果表明,低水平异质性在家族中得以传递并维持至极高年龄。我们未发现任何与长寿和健康衰老相关的异质变异,但基于总量和位点,我们为每个家族确定了独特的异质性图谱。这种家族图谱表明异质性可能有助于家族长寿。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b26a/4100808/fc80970599a2/aging-06-454-g001.jpg

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