Chimileski Scott, Franklin Michael J, Papke R Thane
BMC Biol. 2014 Aug 14;12:65. doi: 10.1186/s12915-014-0065-5.
Archaea share a similar microbial lifestyle with bacteria, and not surprisingly then, also exist within matrix-enclosed communities known as biofilms. Advances in biofilm biology have been made over decades for model bacterial species, and include characterizations of social behaviors and cellular differentiation during biofilm development. Like bacteria, archaea impact ecological and biogeochemical systems. However, the biology of archaeal biofilms is only now being explored. Here, we investigated the development, composition and dynamics of biofilms formed by the haloarchaeon Haloferax volcanii DS2.
Biofilms were cultured in static liquid and visualized with fluorescent cell membrane dyes and by engineering cells to express green fluorescent protein (GFP). Analysis by confocal scanning laser microscopy showed that H. volcanii cells formed microcolonies within 24 h, which developed into larger clusters by 48 h and matured into flake-like towers often greater than 100 μm in height after 7 days. To visualize the extracellular matrix, biofilms formed by GFP-expressing cells were stained with concanavalin A, DAPI, Congo red and thioflavin T. Stains colocalized with larger cellular structures and indicated that the extracellular matrix may contain a combination of polysaccharides, extracellular DNA and amyloid protein. Following a switch to biofilm growth conditions, a sub-population of cells differentiated into chains of long rods sometimes exceeding 25 μm in length, compared to their planktonic disk-shaped morphology. Time-lapse photography of static liquid biofilms also revealed wave-like social motility. Finally, we quantified gene exchange between biofilm cells, and found that it was equivalent to the mating frequency of a classic filter-based experimental method.
The developmental processes, functional properties and dynamics of H. volcanii biofilms provide insight on how haloarchaeal species might persist, interact and exchange DNA in natural communities. H. volcanii demonstrates some biofilm phenotypes similar to bacterial biofilms, but also has interesting phenotypes that may be unique to this organism or to this class of organisms, including changes in cellular morphology and an unusual form of social motility. Because H. volcanii has one of the most advanced genetic systems for any archaeon, the phenotypes reported here may promote the study of genetic and developmental processes in archaeal biofilms.
古菌与细菌有着相似的微生物生活方式,因此,它们存在于被称为生物膜的基质包裹群落中也就不足为奇了。几十年来,针对模式细菌物种,生物膜生物学取得了进展,包括对生物膜发育过程中的社会行为和细胞分化的表征。与细菌一样,古菌也会影响生态和生物地球化学系统。然而,古菌生物膜的生物学特性直到现在才开始被探索。在这里,我们研究了嗜盐古菌沃氏嗜盐菌DS2形成的生物膜的发育、组成和动态变化。
生物膜在静态液体中培养,并用荧光细胞膜染料进行可视化观察,同时通过对细胞进行工程改造使其表达绿色荧光蛋白(GFP)来进行观察。共聚焦扫描激光显微镜分析表明,沃氏嗜盐菌细胞在24小时内形成微菌落,48小时后发展成更大的聚集体,7天后成熟为高度通常超过100μm的片状塔状物。为了可视化细胞外基质,用伴刀豆球蛋白A、4',6-二脒基-2-苯基吲哚(DAPI)、刚果红和硫黄素T对表达GFP的细胞形成的生物膜进行染色。这些染料与较大的细胞结构共定位,表明细胞外基质可能含有多糖、细胞外DNA和淀粉样蛋白的组合。在转换到生物膜生长条件后,与浮游的盘状形态相比,一部分细胞分化成长度有时超过25μm的长杆状链。对静态液体生物膜的延时摄影还揭示了类似波浪的群体运动性。最后,我们对生物膜细胞之间的基因交换进行了量化,发现其与基于经典滤膜实验方法的交配频率相当。
沃氏嗜盐菌生物膜的发育过程、功能特性和动态变化为嗜盐古菌物种在自然群落中如何持续存在、相互作用和交换DNA提供了见解。沃氏嗜盐菌表现出一些与细菌生物膜相似的生物膜表型,但也有一些有趣的表型,可能是该生物体或这类生物体所特有的,包括细胞形态的变化和一种不寻常的群体运动形式。由于沃氏嗜盐菌拥有任何古菌中最先进的遗传系统之一,这里报道的表型可能会促进对古菌生物膜中遗传和发育过程的研究。