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细菌趋性中的普遍响应适应关系。

Universal response-adaptation relation in bacterial chemotaxis.

机构信息

Zentrum für Molekulare Biologie der Universität Heidelberg, DKFZ-ZMBH Alliance, Heidelberg, Germany.

Zentrum für Molekulare Biologie der Universität Heidelberg, DKFZ-ZMBH Alliance, Heidelberg, Germany Max Planck Institute for Terrestrial Microbiology and LOEWE Research Center for Synthetic Microbiology (SYNMIKRO), Marburg, Germany

出版信息

J Bacteriol. 2015 Jan;197(2):307-13. doi: 10.1128/JB.02171-14. Epub 2014 Nov 3.

Abstract

The bacterial strategy of chemotaxis relies on temporal comparisons of chemical concentrations, where the probability of maintaining the current direction of swimming is modulated by changes in stimulation experienced during the recent past. A short-term memory required for such comparisons is provided by the adaptation system, which operates through the activity-dependent methylation of chemotaxis receptors. Previous theoretical studies have suggested that efficient navigation in gradients requires a well-defined adaptation rate, because the memory time scale needs to match the duration of straight runs made by bacteria. Here we demonstrate that the chemotaxis pathway of Escherichia coli does indeed exhibit a universal relation between the response magnitude and adaptation time which does not depend on the type of chemical ligand. Our results suggest that this alignment of adaptation rates for different ligands is achieved through cooperative interactions among chemoreceptors rather than through fine-tuning of methylation rates for individual receptors. This observation illustrates a yet-unrecognized function of receptor clustering in bacterial chemotaxis.

摘要

细菌的趋化策略依赖于对化学浓度的时间比较,其中,在最近的过去经历的刺激变化调制了维持当前游动方向的概率。这种比较所需的短期记忆由适应系统提供,该系统通过趋化受体的活性依赖性甲基化来运作。先前的理论研究表明,在梯度中进行有效的导航需要一个明确定义的适应率,因为记忆时间尺度需要与细菌进行的直跑持续时间相匹配。在这里,我们证明大肠杆菌的趋化途径确实表现出响应幅度和适应时间之间的普遍关系,而这种关系不依赖于化学配体的类型。我们的结果表明,这种针对不同配体的适应率的对齐是通过化学感受器之间的协作相互作用实现的,而不是通过对单个感受器的甲基化速率进行微调来实现的。这一观察结果说明了细菌趋化中受体聚类的一个尚未被认识到的功能。

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本文引用的文献

2
Imprecision of adaptation in Escherichia coli chemotaxis.大肠杆菌趋化性适应的不精确性。
PLoS One. 2014 Jan 8;9(1):e84904. doi: 10.1371/journal.pone.0084904. eCollection 2014.
5
Robust signal processing in living cells.活细胞中的稳健信号处理。
PLoS Comput Biol. 2011 Nov;7(11):e1002218. doi: 10.1371/journal.pcbi.1002218. Epub 2011 Nov 17.
6
Responding to chemical gradients: bacterial chemotaxis.响应化学梯度:细菌的趋化性。
Curr Opin Cell Biol. 2012 Apr;24(2):262-8. doi: 10.1016/j.ceb.2011.11.008. Epub 2011 Dec 9.
7
Response rescaling in bacterial chemotaxis.细菌趋性中的响应重整。
Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13870-5. doi: 10.1073/pnas.1108608108. Epub 2011 Aug 1.
8
Core unit of chemotaxis signaling complexes.趋化信号转导复合物的核心单元。
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