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细菌趋性中的响应重整。

Response rescaling in bacterial chemotaxis.

机构信息

Foundation for Fundamental Research on Matter Institute for Atomic and Molecular Physics, 1098 XG Amsterdam, The Netherlands.

出版信息

Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13870-5. doi: 10.1073/pnas.1108608108. Epub 2011 Aug 1.

Abstract

Sensory systems rescale their response sensitivity upon adaptation according to simple strategies that recur in processes as diverse as single-cell signaling, neural network responses, and whole-organism perception. Here, we study response rescaling in Escherichia coli chemotaxis, where adaptation dynamically tunes the cells' motile response during searches for nutrients. Using in vivo fluorescence resonance energy transfer (FRET) measurements on immobilized cells, we demonstrate that the design of this prokaryotic signaling network follows the fold-change detection (FCD) strategy, responding faithfully to the shape of the input profile irrespective of its absolute intensity. Using a microfluidics-based assay for free swimming cells, we confirm intensity-independent gradient responses at the behavioral level. By theoretical analysis, we identify a set of sufficient conditions for FCD in E. coli chemotaxis, which leads to the prediction that the adaptation timescale is invariant with respect to the background input level. Additional FRET experiments confirm that the adaptation timescale is invariant over an ∼10,000-fold range of background concentrations. These observations in a highly optimized bacterial system support the concept that FCD represents a robust sensing strategy for spatial searches. To our knowledge, these experiments provide a unique demonstration of FCD in any biological sensory system.

摘要

感觉系统根据简单的策略对其响应灵敏度进行调整适应,这些策略在单细胞信号转导、神经网络反应和整个生物体感知等各种过程中反复出现。在这里,我们研究了大肠杆菌趋化性中的响应调整适应,在这种趋化性中,适应性会在细胞寻找营养物质的过程中动态调整其运动反应。我们通过对固定细胞进行体内荧光共振能量转移(FRET)测量,证明了这种原核信号网络的设计遵循了折叠变化检测(FCD)策略,无论输入强度如何,它都能忠实地响应输入轮廓的形状。通过基于微流控的游动细胞测定法,我们在行为水平上证实了与强度无关的梯度响应。通过理论分析,我们确定了大肠杆菌趋化性中 FCD 的一组充分条件,这导致了一个预测,即适应时间尺度与背景输入水平无关。额外的 FRET 实验证实,在背景浓度约为 10000 倍的范围内,适应时间尺度是不变的。在一个高度优化的细菌系统中进行的这些观察结果支持了 FCD 代表了用于空间搜索的稳健传感策略的概念。据我们所知,这些实验在任何生物感觉系统中都提供了 FCD 的独特演示。

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本文引用的文献

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Fold-change detection and scalar symmetry of sensory input fields.感受野的折变化检测与标量对称性。
Proc Natl Acad Sci U S A. 2010 Sep 7;107(36):15995-6000. doi: 10.1073/pnas.1002352107. Epub 2010 Aug 20.
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Bacterial strategies for chemotaxis response.细菌的趋化反应策略。
Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1391-6. doi: 10.1073/pnas.0909673107. Epub 2010 Jan 4.
8
The challenges natural images pose for visual adaptation.自然图像给视觉适应带来的挑战。
Neuron. 2009 Dec 10;64(5):605-16. doi: 10.1016/j.neuron.2009.11.028.
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Chemotaxis: how bacteria use memory.趋化作用:细菌如何利用记忆。
Biol Chem. 2009 Nov;390(11):1097-104. doi: 10.1515/BC.2009.130.
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Logarithmic sensing in Escherichia coli bacterial chemotaxis.大肠杆菌趋化作用中的对数感应
Biophys J. 2009 Mar 18;96(6):2439-48. doi: 10.1016/j.bpj.2008.10.027.

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