Oakes Benjamin L, Nadler Dana C, Savage David F
Department of Molecular & Cell Biology, University of California, Berkeley, California, USA.
Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California, USA.
Methods Enzymol. 2014;546:491-511. doi: 10.1016/B978-0-12-801185-0.00024-6.
CRISPR/Cas systems act to protect the cell from invading nucleic acids in many bacteria and archaea. The bacterial immune protein Cas9 is a component of one of these CRISPR/Cas systems and has recently been adapted as a tool for genome editing. Cas9 is easily targeted to bind and cleave a DNA sequence via a complementary RNA; this straightforward programmability has gained Cas9 rapid acceptance in the field of genetic engineering. While this technology has developed quickly, a number of challenges regarding Cas9 specificity, efficiency, fusion protein function, and spatiotemporal control within the cell remain. In this work, we develop a platform for constructing novel proteins to address these open questions. We demonstrate methods to either screen or select active Cas9 mutants and use the screening technique to isolate functional Cas9 variants with a heterologous PDZ domain inserted within the protein. As a proof of concept, these methods lay the groundwork for the future construction of diverse Cas9 proteins. Straightforward and accessible techniques for genetic editing are helping to elucidate biology in new and exciting ways; a platform to engineer new functionalities into Cas9 will help forge the next generation of genome-modifying tools.
CRISPR/Cas系统在许多细菌和古生菌中发挥作用,保护细胞免受入侵核酸的影响。细菌免疫蛋白Cas9是这些CRISPR/Cas系统之一的组成部分,最近已被用作基因组编辑工具。Cas9很容易通过互补RNA靶向结合并切割DNA序列;这种直接的可编程性使Cas9在基因工程领域迅速得到认可。尽管这项技术发展迅速,但在Cas9的特异性、效率、融合蛋白功能以及细胞内的时空控制等方面仍存在一些挑战。在这项工作中,我们开发了一个构建新型蛋白质的平台来解决这些悬而未决的问题。我们展示了筛选或选择活性Cas9突变体的方法,并使用筛选技术分离出在蛋白质中插入了异源PDZ结构域的功能性Cas9变体。作为概念验证,这些方法为未来构建多样化的Cas9蛋白质奠定了基础。简单易用的基因编辑技术正以新颖且令人兴奋的方式帮助阐明生物学;一个将新功能设计到Cas9中的平台将有助于打造下一代基因组编辑工具。