• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

高通量筛选 CRISPR/Cas9 文库在人类细胞中的功能基因组学研究。

High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells.

机构信息

1] State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing 100871, China [2].

State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing 100871, China.

出版信息

Nature. 2014 May 22;509(7501):487-91. doi: 10.1038/nature13166. Epub 2014 Apr 9.

DOI:10.1038/nature13166
PMID:24717434
Abstract

Targeted genome editing technologies are powerful tools for studying biology and disease, and have a broad range of research applications. In contrast to the rapid development of toolkits to manipulate individual genes, large-scale screening methods based on the complete loss of gene expression are only now beginning to be developed. Here we report the development of a focused CRISPR/Cas-based (clustered regularly interspaced short palindromic repeats/CRISPR-associated) lentiviral library in human cells and a method of gene identification based on functional screening and high-throughput sequencing analysis. Using knockout library screens, we successfully identified the host genes essential for the intoxication of cells by anthrax and diphtheria toxins, which were confirmed by functional validation. The broad application of this powerful genetic screening strategy will not only facilitate the rapid identification of genes important for bacterial toxicity but will also enable the discovery of genes that participate in other biological processes.

摘要

靶向基因组编辑技术是研究生物学和疾病的强大工具,具有广泛的研究应用。与操纵单个基因的工具包的快速发展相比,基于完全丧失基因表达的大规模筛选方法现在才刚刚开始开发。在这里,我们报告了在人类细胞中开发基于聚焦 CRISPR/Cas(成簇的、规律间隔的短回文重复序列/CRISPR 相关)慢病毒文库的方法,以及基于功能筛选和高通量测序分析的基因鉴定方法。使用敲除文库筛选,我们成功鉴定了炭疽和白喉毒素使细胞中毒所必需的宿主基因,这些基因通过功能验证得到了确认。这种强大的遗传筛选策略的广泛应用不仅将有助于快速鉴定对细菌毒性重要的基因,还将能够发现参与其他生物过程的基因。

相似文献

1
High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells.高通量筛选 CRISPR/Cas9 文库在人类细胞中的功能基因组学研究。
Nature. 2014 May 22;509(7501):487-91. doi: 10.1038/nature13166. Epub 2014 Apr 9.
2
CRISPR-Cas9 knockout screening for functional genomics.用于功能基因组学的CRISPR-Cas9基因敲除筛选
Sci China Life Sci. 2014 Jul;57(7):733-4. doi: 10.1007/s11427-014-4684-4. Epub 2014 Jun 10.
3
Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library.利用慢病毒 CRISPR-guide RNA 文库对哺乳动物细胞进行全基因组隐性遗传筛选。
Nat Biotechnol. 2014 Mar;32(3):267-73. doi: 10.1038/nbt.2800. Epub 2013 Dec 23.
4
Repurposing CRISPR/Cas9 for in situ functional assays.CRISPR/Cas9 的重新利用用于原位功能测定。
Genes Dev. 2013 Dec 1;27(23):2602-14. doi: 10.1101/gad.227132.113.
5
A Perspective on the Future of High-Throughput RNAi Screening: Will CRISPR Cut Out the Competition or Can RNAi Help Guide the Way?高通量RNA干扰筛选的未来展望:CRISPR会脱颖而出还是RNA干扰能指引方向?
J Biomol Screen. 2015 Sep;20(8):1040-51. doi: 10.1177/1087057115590069. Epub 2015 Jun 5.
6
Functional Genomics via CRISPR-Cas.通过 CRISPR-Cas 进行功能基因组学。
J Mol Biol. 2019 Jan 4;431(1):48-65. doi: 10.1016/j.jmb.2018.06.034. Epub 2018 Jun 28.
7
A Novel Screening Approach for the Dissection of Cellular Regulatory Networks of NF-κB Using Arrayed CRISPR gRNA Libraries.一种使用阵列 CRISPR gRNA 文库解析 NF-κB 细胞调控网络的新筛选方法。
SLAS Discov. 2020 Jul;25(6):618-633. doi: 10.1177/2472555220926160. Epub 2020 Jun 1.
8
Efficient CRISPR/Cas9 genome editing in a salmonid fish cell line using a lentivirus delivery system.利用慢病毒传递系统在鲑科鱼类细胞系中进行高效的 CRISPR/Cas9 基因组编辑。
BMC Biotechnol. 2020 Jun 23;20(1):35. doi: 10.1186/s12896-020-00626-x.
9
Genotype from Phenotype: Using CRISPR Screens to Dissect Lymphoma Biology.从表型到基因型:利用 CRISPR 筛选解析淋巴瘤生物学。
Methods Mol Biol. 2025;2865:241-257. doi: 10.1007/978-1-0716-4188-0_10.
10
Genome-scale CRISPR-Cas9 knockout and transcriptional activation screening.全基因组规模的CRISPR-Cas9基因敲除和转录激活筛选。
Nat Protoc. 2017 Apr;12(4):828-863. doi: 10.1038/nprot.2017.016. Epub 2017 Mar 23.

引用本文的文献

1
The Role of Prion Protein in Reelin/Dab1 Signaling: Implications for Neurodegeneration.朊蛋白在Reelin/Dab1信号传导中的作用:对神经退行性变的影响
Viruses. 2025 Jun 29;17(7):928. doi: 10.3390/v17070928.
2
Advancements in CRISPR/Cas systems for disease treatment.用于疾病治疗的CRISPR/Cas系统的进展。
Acta Pharm Sin B. 2025 Jun;15(6):2818-2844. doi: 10.1016/j.apsb.2025.05.007. Epub 2025 May 17.
3
Enhancement of CRISPR-Cas12a system through universal circular RNA design.通过通用环状RNA设计增强CRISPR-Cas12a系统

本文引用的文献

1
Genome-scale CRISPR-Cas9 knockout screening in human cells.全基因组规模的 CRISPR-Cas9 基因敲除筛选在人类细胞中的应用。
Science. 2014 Jan 3;343(6166):84-87. doi: 10.1126/science.1247005. Epub 2013 Dec 12.
2
Genetic screens in human cells using the CRISPR-Cas9 system.利用 CRISPR-Cas9 系统在人类细胞中进行遗传筛选。
Science. 2014 Jan 3;343(6166):80-4. doi: 10.1126/science.1246981. Epub 2013 Dec 12.
3
ULtiMATE system for rapid assembly of customized TAL effectors.用于快速组装定制转录激活样效应因子的ULtiMATE系统。
Cell Rep Methods. 2025 Jun 16;5(6):101076. doi: 10.1016/j.crmeth.2025.101076.
4
GLI2-HRD1 axis facilitates 5-FU resistance in gastric cancer cells by regulating ubiquitination degradation of UCK2.GLI2-HRD1轴通过调节UCK2的泛素化降解促进胃癌细胞对5-氟尿嘧啶的耐药性。
Transl Oncol. 2025 Aug;58:102423. doi: 10.1016/j.tranon.2025.102423. Epub 2025 May 24.
5
The Strategy and Application of Gene Attenuation in Metabolic Engineering.基因弱化在代谢工程中的策略与应用
Microorganisms. 2025 Apr 17;13(4):927. doi: 10.3390/microorganisms13040927.
6
Rapid and robust validation of pooled CRISPR knockout screens using CelFi.使用CelFi对汇集的CRISPR基因敲除筛选进行快速且可靠的验证。
Sci Rep. 2025 Apr 17;15(1):13358. doi: 10.1038/s41598-025-96095-3.
7
Zebrafish as a Versatile Model for Cardiovascular Research: Peering into the Heart of the Matter.斑马鱼:心血管研究的通用模型——深入问题核心
Cells. 2025 Apr 2;14(7):531. doi: 10.3390/cells14070531.
8
The P-loop NTPase RUVBL2 is a conserved clock component across eukaryotes.P 环 NTP 酶 RUVBL2 是一种在真核生物中保守的生物钟组件。
Nature. 2025 Mar 26. doi: 10.1038/s41586-025-08797-3.
9
Genome-wide CRISPR Screening Identifies NFκB and c-MET as Druggable Targets to Sensitize Lenvatinib Treatment in Hepatocellular Carcinoma.全基因组CRISPR筛选确定NFκB和c-MET为可药物靶向,使肝癌对乐伐替尼治疗敏感。
Cell Mol Gastroenterol Hepatol. 2025;19(7):101502. doi: 10.1016/j.jcmgh.2025.101502. Epub 2025 Mar 20.
10
Individualized Pooled CRISPR/Cas9 Screenings Identify CDK2 as a Druggable Vulnerability in a Canine Mammary Carcinoma Patient.个体化的CRISPR/Cas9联合筛选确定CDK2是一例犬乳腺癌患者的可药物靶向弱点。
Vet Sci. 2025 Feb 18;12(2):183. doi: 10.3390/vetsci12020183.
PLoS One. 2013 Sep 27;8(9):e75649. doi: 10.1371/journal.pone.0075649. eCollection 2013.
4
Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos.利用 RNA 引导的 Cas9 核酸酶在斑马鱼胚胎中进行基因组编辑。
Cell Res. 2013 Apr;23(4):465-72. doi: 10.1038/cr.2013.45. Epub 2013 Mar 26.
5
RNA-guided human genome engineering via Cas9.通过 Cas9 进行 RNA 引导的人类基因组工程。
Science. 2013 Feb 15;339(6121):823-6. doi: 10.1126/science.1232033. Epub 2013 Jan 3.
6
Multiplex genome engineering using CRISPR/Cas systems.利用 CRISPR/Cas 系统进行多重基因组工程。
Science. 2013 Feb 15;339(6121):819-23. doi: 10.1126/science.1231143. Epub 2013 Jan 3.
7
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.可编程的双 RNA 引导的 DNA 内切酶在适应性细菌免疫中的作用。
Science. 2012 Aug 17;337(6096):816-21. doi: 10.1126/science.1225829. Epub 2012 Jun 28.
8
Negative regulation of human U6 snRNA promoter by p38 kinase through Oct-1.p38 激酶通过 Oct-1 对人 U6 snRNA 启动子的负调控。
Gene. 2012 Apr 15;497(2):200-7. doi: 10.1016/j.gene.2012.01.041. Epub 2012 Jan 28.
9
A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity.一种新型的 TALE 核酸酶支架与低毒性相结合,可实现高基因组编辑活性。
Nucleic Acids Res. 2011 Nov;39(21):9283-93. doi: 10.1093/nar/gkr597. Epub 2011 Aug 3.
10
Targeted genome editing across species using ZFNs and TALENs.利用 ZFNs 和 TALENs 进行跨物种的靶向基因组编辑。
Science. 2011 Jul 15;333(6040):307. doi: 10.1126/science.1207773. Epub 2011 Jun 23.