Prabhu Deene Manik, Quadri Syed Raziuddin, Cheng Juan, Liu Lan, Chen Wei, Yang Ying, Hozzein Wael N, Lingappa Kattimani, Li Wen-Jun
1] State Key Laboratory of Biocontrol, Key Laboratory of Biodiversity Dynamics and Conservation of Guangdong Higher Education Institutes, College of Ecology and Evolution, Sun Yat-Sen University, Guangzhou, China [2] Department of Microbiology, Gulbarga University, Gulbarga, India.
Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, Northern Border University, Arar, Kingdom of Saudi Arabia.
J Antibiot (Tokyo). 2015 May;68(5):318-21. doi: 10.1038/ja.2014.161. Epub 2014 Dec 3.
A moderate growing strain designated as MPKL 26(T) was isolated from a soil sample of Bidar Fort, Karnataka, India. The strain MPKL 26(T) was Gram positive, bent rod in shape. The optimum pH and temperature for growth was 7.0 and 30 °C, respectively. The 16S ribosomal RNA gene sequence analysis revealed that strain MPKL 26(T) was closely related to S. atrocyanea DSM 20127(T) (98.09%), S. flava CW 108(T) (98.04%), S. soli CW 59(T) (97.99%) and S. notoginsengisoli SYP-B575(T) (97.0%) and showed DNA-DNA hybridization relatedness (46.05±1.2, 33.56±2.55, 32.56±1.7 and 26.79±2.5, respectively, between these strains) less than the threshold value for the delineation of genomic species. The peptidoglycon type was A3α type with glycine, alanine, lysine and glutamic acid as the amino acids. The whole-cell sugars were fructose, ribose, mannose, glucose and galactose. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol along with three unknown polar lipids. The fatty acid profile contained C14:0, C16:0, iso-C14:0, iso-C15:0, iso-C16:0, iso-C17:0, anteiso-C15:0, anteiso-C17:0 and summed feature 4 (17:1 iso I/anteiso B). The predominant respiratory quinine was MK-9(H2) with MK-10(H2), MK-8(H2) and MK-8(H4) as minor respiratory quinines. The G+C content of the genomic DNA was 68.8 mol%. On the basis of phenotypic, chemotaxonomic and molecular characteristics, the strain MPKL 26(T) represents a novel species of the genus Sinomonas, for which the name Sinomonas mesophila sp. nov. is proposed with MPKL 26(T) as the type strain (=NCIM 5552(T)= JCM 30094(T)).
从印度卡纳塔克邦比达尔堡的一份土壤样本中分离出一株生长适度的菌株,命名为MPKL 26(T)。菌株MPKL 26(T)革兰氏阳性,呈弯杆状。生长的最适pH值和温度分别为7.0和30 °C。16S核糖体RNA基因序列分析表明,菌株MPKL 26(T)与天蓝链霉菌DSM 20127(T)(98.09%)、黄色链霉菌CW 108(T)(98.04%)、土壤链霉菌CW 59(T)(97.99%)和三七链霉菌SYP-B575(T)(97.0%)密切相关,并且这些菌株之间的DNA-DNA杂交相关性(分别为46.05±1.2、33.56±2.55、32.56±1.7和26.79±2.5)低于基因组种划分的阈值。肽聚糖类型为A3α型,氨基酸为甘氨酸、丙氨酸、赖氨酸和谷氨酸。全细胞糖为果糖、核糖、甘露糖、葡萄糖和半乳糖。极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰肌醇以及三种未知极性脂。脂肪酸谱包含C14:0、C16:0、异-C14:0、异-C15:0、异-C16:0、异-C17:0、anteiso-C15:0、anteiso-C17:0和总和特征4(17:1 iso I/anteiso B)。主要呼吸醌为MK-9(H2),次要呼吸醌为MK-10(H2)、MK-8(H2)和MK-8(H4)。基因组DNA的G+C含量为68.8 mol%。基于表型、化学分类和分子特征,菌株MPKL 26(T)代表中华单胞菌属的一个新物种,为此提出名为嗜中温中华单胞菌(Sinomonas mesophila sp. nov.),以MPKL 26(T)作为模式菌株(=NCIM 5552(T)= JCM 30094(T))。