与荷兰野生两栖动物大规模死亡相关的一种普通产婆蟾病毒样蛙病毒的全基因组序列
Complete genome sequence of a common midwife toad virus-like ranavirus associated with mass mortalities in wild amphibians in the Netherlands.
作者信息
van Beurden Steven J, Hughes Joseph, Saucedo Bernardo, Rijks Jolianne, Kik Marja, Haenen Olga L M, Engelsma Marc Y, Gröne Andrea, Verheije M Helene, Wilkie Gavin
机构信息
Faculty of Veterinary Medicine, Utrecht University, the Netherlands
MRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom.
出版信息
Genome Announc. 2014 Dec 24;2(6):e01293-14. doi: 10.1128/genomeA.01293-14.
Abstract
A ranavirus associated with mass mortalities in wild water frogs (Pelophylax spp.) and other amphibians in the Netherlands since 2010 was isolated, and its complete genome sequence was determined. The virus has a genome of 107,772 bp and shows 96.5% sequence identity with the common midwife toad virus from Spain.
摘要
自2010年以来，在荷兰与野生水蛙（泽蛙属）及其他两栖动物大量死亡相关的一种蛙病毒被分离出来，并测定了其完整的基因组序列。该病毒基因组为107,772碱基对，与来自西班牙的普通产婆蟾病毒具有96.5%的序列同一性。
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Vet Res. 2013 Oct 21;44(1):101. doi: 10.1186/1297-9716-44-101.
2
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J Virol. 2012 Apr;86(7):3617-25. doi: 10.1128/JVI.07108-11. Epub 2012 Feb 1.
3
Ranavirus: past, present and future.蛙病毒：过去、现在和未来。
Biol Lett. 2012 Aug 23;8(4):481-3. doi: 10.1098/rsbl.2011.0951. Epub 2011 Nov 2.
4
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5
RATT: Rapid Annotation Transfer Tool.RATT：快速注释转移工具。
Nucleic Acids Res. 2011 May;39(9):e57. doi: 10.1093/nar/gkq1268. Epub 2011 Feb 8.
6
Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology.利用第二代测序技术进行参考核苷酸的迭代校正（iCORN）。
Bioinformatics. 2010 Jul 15;26(14):1704-7. doi: 10.1093/bioinformatics/btq269. Epub 2010 Jun 18.
7
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8
ABySS: a parallel assembler for short read sequence data.ABySS：一种用于短读长序列数据的并行汇编器。
Genome Res. 2009 Jun;19(6):1117-23. doi: 10.1101/gr.089532.108. Epub 2009 Feb 27.
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