• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

显微镜灯光丝色温对组织学切片数字图像采集标准化过程的影响。

The influence of the microscope lamp filament colour temperature on the process of digital images of histological slides acquisition standardization.

作者信息

Korzynska Anna, Roszkowiak Lukasz, Pijanowska Dorota, Kozlowski Wojciech, Markiewicz Tomasz

出版信息

Diagn Pathol. 2014;9 Suppl 1(Suppl 1):S13. doi: 10.1186/1746-1596-9-S1-S13. Epub 2014 Dec 19.

DOI:10.1186/1746-1596-9-S1-S13
PMID:25565329
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4305971/
Abstract

BACKGROUND

The aim of this study is to compare the digital images of the tissue biopsy captured with optical microscope using bright field technique under various light conditions. The range of colour's variation in immunohistochemically stained with 3,3'-Diaminobenzidine and Haematoxylin tissue samples is immense and coming from various sources. One of them is inadequate setting of camera's white balance to microscope's light colour temperature. Although this type of error can be easily handled during the stage of image acquisition, it can be eliminated with use of colour adjustment algorithms. The examination of the dependence of colour variation from microscope's light temperature and settings of the camera is done as an introductory research to the process of automatic colour standardization.

METHODS

Six fields of view with empty space among the tissue samples have been selected for analysis. Each field of view has been acquired 225 times with various microscope light temperature and camera white balance settings. The fourteen randomly chosen images have been corrected and compared, with the reference image, by the following methods: Mean Square Error, Structural SIMilarity and visual assessment of viewer.

RESULTS

For two types of backgrounds and two types of objects, the statistical image descriptors: range, median, mean and its standard deviation of chromaticity on a and b channels from CIELab colour space, and luminance L, and local colour variability for objects' specific area have been calculated. The results have been averaged for 6 images acquired in the same light conditions and camera settings for each sample.

CONCLUSIONS

The analysis of the results leads to the following conclusions: (1) the images collected with white balance setting adjusted to light colour temperature clusters in certain area of chromatic space, (2) the process of white balance correction for images collected with white balance camera settings not matched to the light temperature moves image descriptors into proper chromatic space but simultaneously the value of luminance changes. So the process of the image unification in a sense of colour fidelity can be solved in separate introductory stage before the automatic image analysis.

摘要

背景

本研究的目的是比较在不同光照条件下,使用明场技术通过光学显微镜拍摄的组织活检数字图像。用3,3'-二氨基联苯胺和苏木精免疫组织化学染色的组织样本颜色变化范围极大,且来源多样。其中一个原因是相机白平衡与显微镜光色温设置不当。尽管这类错误在图像采集阶段很容易处理,但可通过使用颜色调整算法将其消除。研究显微镜光温度和相机设置对颜色变化的依赖性,作为自动颜色标准化过程的前期研究。

方法

选择六个组织样本间有空隙的视野进行分析。每个视野在不同显微镜光温度和相机白平衡设置下采集225次。通过以下方法对随机选择的14张图像与参考图像进行校正和比较:均方误差、结构相似性和观察者视觉评估。

结果

针对两种背景和两种物体类型,计算了统计图像描述符:CIELab颜色空间中a和b通道的色度范围、中位数、均值及其标准差,以及亮度L,还有物体特定区域的局部颜色变异性。对每个样本在相同光照条件和相机设置下采集的6张图像的结果进行了平均。

结论

对结果的分析得出以下结论:(1)白平衡设置调整到光色温时采集的图像在色度空间的特定区域聚类;(2)相机白平衡设置与光温度不匹配时采集的图像进行白平衡校正的过程,会将图像描述符移至合适的色度空间,但同时亮度值会发生变化。因此,在自动图像分析之前的单独前期阶段,可以解决颜色保真度意义上的图像统一问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/6e7c18bb50a2/1746-1596-9-S1-S13-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/60b9920a18c0/1746-1596-9-S1-S13-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/2d2e6c12c9d0/1746-1596-9-S1-S13-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/c0d8dcc02457/1746-1596-9-S1-S13-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/6e7c18bb50a2/1746-1596-9-S1-S13-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/60b9920a18c0/1746-1596-9-S1-S13-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/2d2e6c12c9d0/1746-1596-9-S1-S13-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/c0d8dcc02457/1746-1596-9-S1-S13-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9f6/4305971/6e7c18bb50a2/1746-1596-9-S1-S13-4.jpg

相似文献

1
The influence of the microscope lamp filament colour temperature on the process of digital images of histological slides acquisition standardization.显微镜灯光丝色温对组织学切片数字图像采集标准化过程的影响。
Diagn Pathol. 2014;9 Suppl 1(Suppl 1):S13. doi: 10.1186/1746-1596-9-S1-S13. Epub 2014 Dec 19.
2
Validation of various adaptive threshold methods of segmentation applied to follicular lymphoma digital images stained with 3,3'-Diaminobenzidine&Haematoxylin.验证各种适用于 3,3'-二氨基联苯胺和苏木精染色滤泡性淋巴瘤数字图像的分割自适应阈值方法。
Diagn Pathol. 2013 Mar 25;8:48. doi: 10.1186/1746-1596-8-48.
3
Automated image mosaics by non-automated light microscopes: the MicroMos software tool.非自动化光学显微镜的自动图像拼接:MicroMos 软件工具。
J Microsc. 2013 Dec;252(3):226-50. doi: 10.1111/jmi.12084. Epub 2013 Sep 20.
4
Chromaticity and correlated color temperature of the white point in medical liquid-crystal display.医用液晶显示器中白点的色度与相关色温
Med Phys. 2012 Aug;39(8):5127-35. doi: 10.1118/1.4737869.
5
Color Correction of Stained Tissue Section Images by Histogram Transfer According to Control Images.根据对照图像通过直方图转移对染色组织切片图像进行颜色校正。
Anal Quant Cytopathol Histpathol. 2015 Jun;37(3):177-86.
6
The use of digital imaging for colour matching and communication in restorative dentistry.数字成像在口腔修复学中用于颜色匹配和交流的应用。
Br Dent J. 2005 Jul 9;199(1):43-9; discussion 33. doi: 10.1038/sj.bdj.4812559.
7
Quantification of immunohistochemical staining by color translation and automated thresholding.通过颜色转换和自动阈值化对免疫组织化学染色进行定量分析。
Anal Quant Cytol Histol. 1997 Apr;19(2):107-13.
8
Applications and challenges of digital pathology and whole slide imaging.数字病理学与全切片成像的应用及挑战
Biotech Histochem. 2015 Jul;90(5):341-7. doi: 10.3109/10520295.2015.1044566. Epub 2015 May 15.
9
The challenge of objective scar colour assessment in a clinical setting: using digital photography.临床环境中客观瘢痕颜色评估的挑战:使用数码摄影。
J Wound Care. 2015 Aug;24(8):379-87. doi: 10.12968/jowc.2015.24.8.379.
10
Automatic colorimetric calibration of human wounds.人体伤口的自动比色校准。
BMC Med Imaging. 2010 Mar 18;10:7. doi: 10.1186/1471-2342-10-7.

引用本文的文献

1
PATMA: parser of archival tissue microarray.PATMA:存档组织微阵列解析器
PeerJ. 2016 Dec 1;4:e2741. doi: 10.7717/peerj.2741. eCollection 2016.

本文引用的文献

1
Pathology imaging informatics for quantitative analysis of whole-slide images.病理学成像信息学用于全切片图像的定量分析。
J Am Med Inform Assoc. 2013 Nov-Dec;20(6):1099-108. doi: 10.1136/amiajnl-2012-001540. Epub 2013 Aug 19.
2
Optimization of a widefield structured illumination microscope for non-destructive assessment and quantification of nuclear features in tumor margins of a primary mouse model of sarcoma.优化宽场结构光照明显微镜,用于无损评估和定量原发性肉瘤小鼠模型肿瘤边缘的核特征。
PLoS One. 2013 Jul 23;8(7):e68868. doi: 10.1371/journal.pone.0068868. Print 2013.
3
Automated classification of immunostaining patterns in breast tissue from the human protein atlas.
来自人类蛋白质图谱的乳腺组织免疫染色模式的自动分类
J Pathol Inform. 2013 Mar 30;4(Suppl):S14. doi: 10.4103/2153-3539.109881. Print 2013.
4
Quality evaluation of microscopy and scanned histological images for diagnostic purposes.用于诊断目的的显微镜和扫描组织学图像的质量评估。
Micron. 2012 Feb;43(2-3):334-43. doi: 10.1016/j.micron.2011.09.010. Epub 2011 Oct 6.
5
JPEG2000 for automated quantification of immunohistochemically stained cell nuclei: a comparative study with standard JPEG format.JPEG2000 用于免疫组化染色细胞核自动定量:与标准 JPEG 格式的比较研究。
Virchows Arch. 2011 Feb;458(2):237-45. doi: 10.1007/s00428-010-1008-3. Epub 2010 Nov 18.
6
A no-reference objective image sharpness metric based on the notion of just noticeable blur (JNB).一种基于刚可察觉模糊(JNB)概念的无参考客观图像清晰度度量。
IEEE Trans Image Process. 2009 Apr;18(4):717-28. doi: 10.1109/TIP.2008.2011760.
7
Image quality assessment: from error visibility to structural similarity.图像质量评估:从误差可见性到结构相似性。
IEEE Trans Image Process. 2004 Apr;13(4):600-12. doi: 10.1109/tip.2003.819861.
8
Quantitative phase-amplitude microscopy I: optical microscopy.定量相幅显微镜术I:光学显微镜术
J Microsc. 2002 Jun;206(Pt 3):194-203. doi: 10.1046/j.1365-2818.2002.01027.x.