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基因芯片表达谱分析揭示大梯度强磁场下骨细胞中能量代谢相关基因的变化。

GeneChip expression profiling reveals the alterations of energy metabolism related genes in osteocytes under large gradient high magnetic fields.

作者信息

Wang Yang, Chen Zhi-Hao, Yin Chun, Ma Jian-Hua, Li Di-Jie, Zhao Fan, Sun Yu-Long, Hu Li-Fang, Shang Peng, Qian Ai-Rong

机构信息

Key Laboratory for Space Biosciences & Biotechnology, Institute of Special Environmental Biophysics, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China.

出版信息

PLoS One. 2015 Jan 30;10(1):e0116359. doi: 10.1371/journal.pone.0116359. eCollection 2015.

Abstract

The diamagnetic levitation as a novel ground-based model for simulating a reduced gravity environment has recently been applied in life science research. In this study a specially designed superconducting magnet with a large gradient high magnetic field (LG-HMF), which can provide three apparent gravity levels (μ-g, 1-g, and 2-g), was used to simulate a space-like gravity environment. Osteocyte, as the most important mechanosensor in bone, takes a pivotal position in mediating the mechano-induced bone remodeling. In this study, the effects of LG-HMF on gene expression profiling of osteocyte-like cell line MLO-Y4 were investigated by Affymetrix DNA microarray. LG-HMF affected osteocyte gene expression profiling. Differentially expressed genes (DEGs) and data mining were further analyzed by using bioinfomatic tools, such as DAVID, iReport. 12 energy metabolism related genes (PFKL, AK4, ALDOC, COX7A1, STC1, ADM, CA9, CA12, P4HA1, APLN, GPR35 and GPR84) were further confirmed by real-time PCR. An integrated gene interaction network of 12 DEGs was constructed. Bio-data mining showed that genes involved in glucose metabolic process and apoptosis changed notablly. Our results demostrated that LG-HMF affected the expression of energy metabolism related genes in osteocyte. The identification of sensitive genes to special environments may provide some potential targets for preventing and treating bone loss or osteoporosis.

摘要

抗磁悬浮作为一种用于模拟微重力环境的新型地面模型,最近已应用于生命科学研究。在本研究中,使用了一种专门设计的具有大梯度高磁场(LG-HMF)的超导磁体,该磁体可提供三种表观重力水平(微重力、1g和2g),以模拟类似太空的重力环境。骨细胞作为骨骼中最重要的机械传感器,在介导机械诱导的骨重塑中起着关键作用。在本研究中,通过Affymetrix DNA微阵列研究了LG-HMF对骨细胞样细胞系MLO-Y4基因表达谱的影响。LG-HMF影响骨细胞基因表达谱。使用DAVID、iReport等生物信息学工具进一步分析差异表达基因(DEG)和数据挖掘。通过实时PCR进一步证实了12个与能量代谢相关的基因(PFKL、AK4、ALDOC、COX7A1、STC1、ADM、CA9、CA12、P4HA1、APLN、GPR35和GPR84)。构建了12个DEG的综合基因相互作用网络。生物数据挖掘表明,参与葡萄糖代谢过程和细胞凋亡的基因发生了显著变化。我们的结果表明,LG-HMF影响骨细胞中能量代谢相关基因的表达。鉴定对特殊环境敏感的基因可能为预防和治疗骨质流失或骨质疏松症提供一些潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a69/4312085/e548e9afad1e/pone.0116359.g001.jpg

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