Lee Chi Chung, Hu Yilin, Ribbe Markus W
Department of Molecular Biology and Biochemistry, University of California, Irvine, Irvine, California, USA.
mBio. 2015 Apr 14;6(2):e00307-15. doi: 10.1128/mBio.00307-15.
The L-cluster is an all-iron homolog of nitrogenase cofactors. Driven by europium(II) diethylenetriaminepentaacetate [Eu(II)-DTPA], the isolated L-cluster is capable of ATP-independent reduction of CO and CN(-) to C1 to C4 and C1 to C6 hydrocarbons, respectively. Compared to its cofactor homologs, the L-cluster generates considerably more CH4 from the reduction of CO and CN(-), which could be explained by the presence of a "free" Fe atom that is "unmasked" by homocitrate as an additional site for methanation. Moreover, the elevated CH4 formation is accompanied by a decrease in the amount of longer hydrocarbons and/or the lengths of the hydrocarbon products, illustrating a competition between CH4 formation/release and C-C coupling/chain extension. These observations suggest the possibility of designing simpler synthetic clusters for hydrocarbon formation while establishing the L-cluster as a platform for mechanistic investigations of CO and CN(-) reduction without complications originating from the heterometal and homocitrate components.
Nitrogenase is a metalloenzyme that is highly complex in structure and uniquely versatile in function. It catalyzes two reactions that parallel two important industrial processes: the reduction of nitrogen to ammonia, which parallels the Haber-Bosch process in ammonia production, and the reduction of carbon monoxide to hydrocarbons, which parallels the Fischer-Tropsch process in fuel production. Thus, the significance of nitrogenase can be appreciated from the perspective of the useful products it generates: (i) ammonia, the "fixed" nitrogen that is essential for the existence of the entire human population; and (ii) hydrocarbons, the "recycled" carbon fuel that could be used to directly address the worldwide energy shortage. This article provides initial insights into the catalytic characteristics of various nitrogenase cofactors in hydrocarbon formation. The reported assay system provides a useful tool for mechanistic investigations of this reaction while suggesting the possibility of designing bioinspired catalysts based on nitrogenase cofactors.
L-簇是固氮酶辅因子的全铁同系物。在二乙三胺五乙酸铕(II)[Eu(II)-DTPA]的驱动下,分离出的L-簇能够分别将CO和CN⁻独立于ATP还原为C1至C4和C1至C6的碳氢化合物。与其辅因子同系物相比,L-簇从CO和CN⁻的还原中产生的CH₄要多得多,这可以通过存在一个被高柠檬酸“暴露”的“游离”Fe原子来解释,该原子是甲烷化的额外位点。此外,CH₄生成量的增加伴随着较长碳氢化合物数量的减少和/或碳氢化合物产物长度的缩短,这说明了CH₄形成/释放与C-C偶联/链延伸之间的竞争。这些观察结果表明,有可能设计出更简单的用于碳氢化合物形成的合成簇,同时将L-簇确立为一个用于研究CO和CN⁻还原机理的平台,而不会因异金属和高柠檬酸成分产生复杂情况。
固氮酶是一种金属酶,结构高度复杂,功能独特多样。它催化两个与两个重要工业过程平行的反应:将氮还原为氨,这与氨生产中的哈伯-博施法平行;将一氧化碳还原为碳氢化合物,这与燃料生产中的费托法平行。因此,从固氮酶产生的有用产物的角度可以理解其重要性:(i)氨,即对整个人类生存至关重要的“固定”氮;(ii)碳氢化合物,即可用于直接解决全球能源短缺问题的“循环利用”碳燃料。本文提供了对各种固氮酶辅因子在碳氢化合物形成中的催化特性的初步见解。所报道的测定系统为该反应的机理研究提供了一个有用的工具,同时暗示了基于固氮酶辅因子设计仿生催化剂的可能性。