Zhang Hao, Guo Su-Hui, Sun Bin, Zhang Jing, Cheng Ming-Gen, Li Qiang, Hong Qing, Huang Xing
Key Laboratory of Microbiology of Agricultural Environment, Ministry of Agriculture, College of life sciences, Nanjing Agricultural University, Nanjing, 210095, PR China.
Int J Syst Evol Microbiol. 2015 Aug;65(8):2447-2452. doi: 10.1099/ijs.0.000281. Epub 2015 Apr 23.
A Gram-staining-negative, facultatively anaerobic, rod-shaped, nitrogen-fixing bacterial strain, designated TULL-AT, was isolated from a farmland soil sample in Yixing, China. The optimal conditions for growth were 30 °C, pH 7.0-8.0 and 0% (w/v) NaCl. Q8 was the dominant respiratory quinone and the major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and aminophospholipid. Phylogenetic analysis of 16S rRNA gene sequences showed that strain TULL-AT was most closely related to Mangrovibacter plantisponsor MSSRF40T (99.6%), followed by Salmonella enterica subsp. diarizonae DSM 14847T (96.8%) and Cronobacter condimenti 1330T (96.8 %). Sequence analysis of the genes rpoB, gyrB and hsp60 revealed that those of strain TULL-AT also exhibit high sequence similarity with those of the species M. plantisponsor MSSRF40T (95.5, 94.1 and 93.4%). The genomic DNA G+C content was 52 mol%. The major fatty acids of strain TULL-AT were C16 : 0, C16 : 1ω7c and/or C16 : 1ω6c, C18 : 1ω7c /C18 : 1ω6c, C14 : 0, C14 : 0 3-OH/iso-C16 : 1 I and iso-C17 : 1 I and/or anteiso-C17 : 1 B. Strain TULL-AT showed low DNA-DNA relatedness with M. plantisponsor MSSRF40T (35.10 ± 1.41%). Based on the multiple genotypic and phenotypic data, strain TULL-AT is considered to represent a novel species of the genus Mangrovibacter, for which the name Mangrovibacter yixingensis sp. nov. is proposed. The type strain is TULL-AT ( = ACCC 19709T = KCTC 42181T).
从中国宜兴的农田土壤样本中分离出一株革兰氏染色阴性、兼性厌氧、杆状、固氮细菌菌株,命名为TULL-AT。其最佳生长条件为30 °C、pH 7.0 - 8.0和0%(w/v)NaCl。泛醌Q8是主要呼吸醌,主要极性脂为磷脂酰乙醇胺、磷脂酰甘油和氨基磷脂。16S rRNA基因序列的系统发育分析表明,菌株TULL-AT与植物赞助红树林杆菌Mangrovibacter plantisponsor MSSRF40T关系最为密切(99.6%),其次是肠炎沙门氏菌亚利桑那亚种Salmonella enterica subsp. diarizonae DSM 14847T(96.8%)和调味品克罗诺杆菌Cronobacter condimenti 1330T(96.8%)。rpoB、gyrB和hsp60基因的序列分析表明,菌株TULL-AT的这些基因与植物赞助红树林杆菌M. plantisponsor MSSRF40T的基因也表现出高度序列相似性(分别为95.5%、94.1%和93.4%)。基因组DNA G+C含量为52 mol%。菌株TULL-AT的主要脂肪酸为C16 : 0、C16 : 1ω7c和/或C16 : 1ω6c、C18 : 1ω7c /C18 : 1ω6c、C14 : 0、C14 : 0 3-OH/异-C16 : 1 I和异-C17 : 1 I和/或anteiso-C17 : 1 B。菌株TULL-AT与植物赞助红树林杆菌M. plantisponsor MSSRF40T的DNA-DNA相关性较低(35.10 ± 1.41%)。基于多种基因型和表型数据,菌株TULL-AT被认为代表红树林杆菌属的一个新物种,为此提出名为宜兴红树林杆菌Mangrovibacter yixingensis sp. nov.。模式菌株为TULL-AT( = ACCC 19709T = KCTC 42181T)。