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新种普氏醋厌氧菌,一种从普洛尼热液区(新喀里多尼亚)的碳酸盐烟囱中分离出的厌氧嗜碱细菌。

Acetoanaerobium pronyense sp. nov., an anaerobic alkaliphilic bacterium isolated from a carbonate chimney of the Prony Hydrothermal Field (New Caledonia).

作者信息

Bes Méline, Merrouch Mériem, Joseph Manon, Quéméneur Marianne, Payri Claude, Pelletier Bernard, Ollivier Bernard, Fardeau Marie-Laure, Erauso Gaël, Postec Anne

机构信息

Aix Marseille Université, CNRS/INSU, IRD, Mediterranean Institute of Oceanography (MIO), UM 110, 13288 Marseille, France.

Centre IRD de Nouméa, 101 Promenade Roger Laroque, BP A5 - 98848 Nouméa cedex, Nouvelle-Calédonie, France.

出版信息

Int J Syst Evol Microbiol. 2015 Aug;65(8):2574-2580. doi: 10.1099/ijs.0.000307. Epub 2015 May 6.

DOI:10.1099/ijs.0.000307
PMID:25948619
Abstract

A novel anaerobic bacterial strain, ST07-YET, was isolated from a carbonate chimney of the Prony Hydrothermal Field (PHF) in New Caledonia. Cells were Gram-stain-positive, straight rods (0.7-0.8 × 3.0-5.0 μm) and motile by means of lateral flagella. Strain ST07-YET was mesophilic (optimum 35 °C), moderately alkaliphilic and halotolerant (optimum pH 8.7 and 5 g l- 1 NaCl). Elemental sulfur, sulfate, thiosulfate, sulfite, nitrate and nitrite were not used as terminal electron acceptors. Yeast extract, peptone, tryptone, Casamino acids, crotonate, pyruvate, galactose, maltose, sucrose, ribose, trehalose and glucose were used as carbon sources. Glucose fermentation led to acetate, H2 and CO2 formation. Arginine, serine, histidine, lysine, methionine and cysteine improved growth, but the Stickland reaction was negative for the combinations of amino acids tested. The major metabolic products from yeast extract fermentation were H2, CO2, acetate, butyrate, isobutyrate, isovalerate and propionate. The predominant cellular fatty acids were C16  :  0, C16  :  1cis9, C14  :  0 and C16  :  1cis7 (>5 % of total fatty acids). The G+C content of the genomic DNA was 32.9 mol%. Phylogenetic analysis revealed that strain ST07-YET was most closely related to Clostridium sticklandii DSM 519T and Acetoanaerobium noterae NOT-3T (96.7 % and 96.8 % 16S rRNA gene sequence similarity, respectively). On the basis of phylogenetic, chemotaxonomic and physiological properties, strain ST07-YET is proposed to represent a novel species of the genus Acetoanaerobium (order Clostridiales, phylum Firmicutes) with the name Acetoanaerobium pronyense sp. nov. The type strain is ST07-YET ( = DSM 27512T = JCM 19400T).

摘要

从新喀里多尼亚普罗尼热液区(PHF)的碳酸盐烟囱中分离出一种新型厌氧细菌菌株ST07-YET。细胞革兰氏染色呈阳性,为直杆状(0.7 - 0.8×3.0 - 5.0μm),借助侧生鞭毛运动。菌株ST07-YET为嗜温菌(最适温度35°C),中度嗜碱且耐盐(最适pH 8.7,5 g l-1 NaCl)。元素硫、硫酸盐、硫代硫酸盐、亚硫酸盐、硝酸盐和亚硝酸盐均未用作末端电子受体。酵母提取物、蛋白胨、胰蛋白胨、酪蛋白氨基酸、巴豆酸盐、丙酮酸、半乳糖、麦芽糖、蔗糖、核糖、海藻糖和葡萄糖用作碳源。葡萄糖发酵产生乙酸盐、H2和CO2。精氨酸、丝氨酸、组氨酸、赖氨酸、蛋氨酸和半胱氨酸可促进生长,但对所测试的氨基酸组合,斯特克兰德反应呈阴性。酵母提取物发酵的主要代谢产物为H2、CO2、乙酸盐、丁酸盐、异丁酸盐、异戊酸盐和丙酸盐。主要的细胞脂肪酸为C16∶0、C16∶1cis9、C14∶0和C16∶1cis7(占总脂肪酸的5%以上)。基因组DNA的G + C含量为32.9 mol%。系统发育分析表明,菌株ST07-YET与斯氏梭菌DSM 519T和诺氏乙酸厌氧菌NOT-3T关系最为密切(16S rRNA基因序列相似性分别为96.7%和96.8%)。基于系统发育、化学分类和生理特性,菌株ST07-YET被提议代表乙酸厌氧菌属(梭菌目,厚壁菌门)的一个新物种,命名为普罗尼乙酸厌氧菌(Acetoanaerobium pronyense sp. nov.)。模式菌株为ST07-YET(= DSM 27512T = JCM 19400T)。

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