Wang Kaibiao, Zhang Lei, Liu Yanshuang, Pan Yuanyuan, Meng Lin, Xu Tong, Zhang Cheng, Liu Henan, Hong Shan, Huang Haipeng, Jiang Juquan
Department of Microbiology and Biotechnology, College of Life Sciences, Northeast Agricultural University, Harbin, 150030, PR China.
Int J Syst Evol Microbiol. 2015 Sep;65(9):3024-3030. doi: 10.1099/ijs.0.000372. Epub 2015 Jun 5.
A Gram-stain positive, strictly aerobic, non-motile and coccus-shaped actinobacterium, designated strain NEAU-ST5-33(T), was isolated from saline and alkaline soils in Dechang Township, Zhaodong City, PR China. It formed beige-yellow colonies and grew at NaCl concentrations of 0-5% (w/v) (optimum 0%), at pH 6.0-9.0 (optimum pH 7.0) and over a temperature range of 4-50 °C (optimum 35 °C). Based on 16S rRNA gene sequence analysis, strain NEAU-ST5-33(T) was phylogenetically closely related to the type strains of species of the genus Kocuria, Kocuria polaris CMS 76or(T), Kocuria rosea DSM 20447(T), Kocuria turfanensis HO-9042(T), Kocuria aegyptia YIM 70003(T), Kocuria himachalensis K07-05(T) and Kocuria flava HO-9041(T), with respective sequence similarities of 98.8%, 98.8%, 98.3%, 98.1%, 98.1% and 97.9%. DNA-DNA hybridization relatedness values of strain NEAU-ST5-33(T) with type strains of the closely related species ranged from 54 ± 1% to 34 ± 1%. The DNA G+C content was 61.2 mol%. The major fatty acids (>5%) were C15 : 0 anteiso, C15 : 0 iso and C16 : 1ω7c and/or C16 : 1ω6c. The major menaquinone detected was MK-8 (H2), and the polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, one unknown aminolipid and one unknown lipid. On the basis of the genotypic, chemotaxonomic and phenotypic data, we propose that strain NEAU-ST5-33(T) represents a novel species of the genus Kocuria, with the name Kocuria dechangensis sp. nov. The type strain is NEAU-ST5-33(T) ( = CGMCC 1.12187(T) = DSM 25872(T)).
从中国黑龙江省肇东市德昌乡盐碱土中分离出一株革兰氏染色阳性、严格需氧、无运动性的球形放线菌,命名为菌株NEAU-ST5-33(T)。该菌株形成米黄色菌落,在NaCl浓度为0-5%(w/v)(最适浓度0%)、pH值为6.0-9.0(最适pH值7.0)以及温度范围为4-50℃(最适温度35℃)的条件下生长。基于16S rRNA基因序列分析,菌株NEAU-ST5-33(T)在系统发育上与科氏菌属的模式菌株密切相关,如极地科氏菌CMS 76or(T)、玫瑰色科氏菌DSM 20447(T)、吐鲁番科氏菌HO-9042(T)、埃及科氏菌YIM 70003(T)、喜马偕尔科氏菌K07-05(T)和黄色科氏菌HO-9041(T),其序列相似性分别为98.8%、98.8%、98.3%、98.1%、98.1%和97.9%。菌株NEAU-ST5-33(T)与密切相关物种的模式菌株的DNA-DNA杂交相关值在54±1%至34±1%之间。DNA G+C含量为61.2 mol%。主要脂肪酸(>5%)为anteiso-C15 : 0、iso-C15 : 0和C16 : 1ω7c和/或C16 : 1ω6c。检测到的主要甲基萘醌为MK-8(H2),极性脂质由二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油、一种未知氨基脂质和一种未知脂质组成。基于基因型、化学分类学和表型数据,我们提议菌株NEAU-ST5-33(T)代表科氏菌属的一个新物种,命名为德昌科氏菌(Kocuria dechangensis sp. nov.)。模式菌株为NEAU-ST5-33(T)(= CGMCC 1.12187(T) = DSM 25872(T))。