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从土壤中分离出的新种武水黄杆菌。

Flavisolibacter swuensis sp. nov. isolated from soil.

作者信息

Joo Eun Sun, Cha Seho, Kim Myung Kyum, Jheong Weonhwa, Seo Taegun, Srinivasan Sathiyaraj

机构信息

Department of Bio & Environmental Technology, College of Natural Science, Seoul Women's University, Seoul, 139-774, Republic of Korea.

出版信息

J Microbiol. 2015 Jul;53(7):442-7. doi: 10.1007/s12275-015-5241-y. Epub 2015 Jun 27.

Abstract

A Gram-staining-negative, non-motile, non-spore-forming, and rod-shaped bacterium designated as strain SR2-4-2(T) was isolated from soil in South Korea. Phylogenetic analysis based on 16S rRNA gene sequence of strain SR2-4-2(T) revealed that it belonged to the genus of Flavisolibacter, family of Chitinophagaceae, and class of Sphingobacteriia. It shared sequence similarities with Flavisolibacter ginsengisoli Gsoil 643(T) (96.4%), Flavisolibacter ginsengiterrae Gsoil 492(T) (96.3%), and Flavisolibacter rigui 02SUJ3(T) (93.0%). Chemotaxonomic data revealed that its predominant fatty acids were iso-C15:0 (26.4%) and iso-C17:0 3OH (10.7%). Its major polar lipid was phosphatidylethanolamine (PE) and its predominant respiratory quinone was MK-7. The G+C content of genomic DNA of the strain SR2-4-2(T) DNA was 45.0%. Based on the phylogenetic, chemotaxonomic, and phenotypic data, the strain SR2-4-2(T) (=JCM 19974(T) =KEMB 9004-156(T)) is classified as a type strain of a novel species for which the name of Flavisolibacter swuensis sp. nov. is proposed.

摘要

从韩国土壤中分离出一株革兰氏染色阴性、无运动性、不产芽孢的杆状细菌,命名为菌株SR2-4-2(T)。基于菌株SR2-4-2(T)的16S rRNA基因序列的系统发育分析表明,它属于黄杆菌属、噬几丁质菌科、鞘脂杆菌纲。它与参地黄杆菌Gsoil 643(T)(96.4%)、人参土黄杆菌Gsoil 492(T)(96.3%)和瑞氏黄杆菌02SUJ3(T)(93.0%)具有序列相似性。化学分类数据显示,其主要脂肪酸为异C15:0(26.4%)和异C17:0 3OH(10.7%)。其主要极性脂为磷脂酰乙醇胺(PE),主要呼吸醌为MK-7。菌株SR2-4-2(T) DNA的基因组DNA的G+C含量为45.0%。基于系统发育、化学分类和表型数据,菌株SR2-4-2(T)(=JCM 19974(T)=KEMB 9004-156(T))被分类为一个新物种的模式菌株,为此提出了新种名称参地黄杆菌(Flavisolibacter swuensis sp. nov.)。

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