Eom Keeseon S, Park Hansol, Lee Dongmin, Choe Seongjun, Kim Kyu-Heon, Jeon Hyeong-Kyu
Department of Parasitology, Medical Research Institute and Parasite Resource Bank, Chungbuk National University School of Medicine, Cheongju 362-763, Korea.
Ministry of Food and Drug Safety, Cheongju 361-709, Korea.
Korean J Parasitol. 2015 Aug;53(4):455-63. doi: 10.3347/kjp.2015.53.4.455. Epub 2015 Aug 25.
The present study was performed to compare the mitochondrial genomes between 2 Spirometra tapeworms, Spirometra erinaceieuropaei and Spirometra decipiens (Cestoidea: Diphyllobothriidae), which larval stages are important etiological agents of sparganosis in humans. For each species, the full mitochondrial genome was amplified in 8 overlapping fragments using total genomic DNA purified from a single worm as the template. The mitochondrial genomes were 13,643 bp (S. erinaceieuropaei) and 13,641 bp (S. decipiens) in length and contained 36 genes; 12 protein-coding genes, 2 ribosomal RNA (rRNA, small and large subunits), and 22 transfer RNAs (tRNAs). The 12 protein-coding genes constituted 10,083 bp (S. erinaceieuropaei) and 10,086 bp (S. decipiens) of their respective mitochondrial genomes. The tRNA genes, ranging in length from 56 to 70 bp, were identified based on putative secondary structures such as the typical cloverleaf shape. A total of 23 intergenic sequences, varying from 1 to 204 bp in size, were interspersed in S. erinaceieuropaei (total, 504 bp) and S. decipiens (total, 496 bp) mtDNA. The 12 protein-coding genes of S. erinaceieuropaei and S. decipiens differed by 12.4%, whereas the overall difference in mtDNA sequence between S. erinaceieuropaei and S. decipiens was 12.9%. Thus, from the standpoint of the mitochondrial genome, S. decipiens represents a valid species that can be distinguished from S. erinaceieuropaei.
本研究旨在比较两种裂头绦虫,即猬迭宫绦虫(Spirometra erinaceieuropaei)和迷惑迭宫绦虫(Spirometra decipiens)(绦虫纲:双叶槽科)的线粒体基因组,这两种绦虫的幼虫阶段是人体裂头蚴病的重要病原体。对于每个物种,以从单条虫体中纯化的总基因组DNA为模板,通过8个重叠片段扩增出完整的线粒体基因组。猬迭宫绦虫的线粒体基因组长度为13,643 bp,迷惑迭宫绦虫的线粒体基因组长度为13,641 bp,均包含36个基因;12个蛋白质编码基因、2个核糖体RNA(rRNA,小亚基和大亚基)和22个转运RNA(tRNA)。12个蛋白质编码基因分别占其各自线粒体基因组的10,083 bp(猬迭宫绦虫)和10,086 bp(迷惑迭宫绦虫)。根据推定的二级结构(如典型的三叶草形状)鉴定出长度在56至70 bp之间的tRNA基因。猬迭宫绦虫(总计504 bp)和迷惑迭宫绦虫(总计496 bp)的线粒体DNA中散布着总共23个基因间序列,大小从1至204 bp不等。猬迭宫绦虫和迷惑迭宫绦虫的12个蛋白质编码基因差异为12.4%,而猬迭宫绦虫和迷惑迭宫绦虫线粒体DNA序列的总体差异为12.9%。因此,从线粒体基因组的角度来看,迷惑迭宫绦虫是一个可与猬迭宫绦虫区分开来的有效物种。