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使用DNA适配体检测新鲜农产品上的微小隐孢子虫卵囊。

Detection of Cryptosporidium parvum Oocysts on Fresh Produce Using DNA Aptamers.

作者信息

Iqbal Asma, Labib Mahmoud, Muharemagic Darija, Sattar Syed, Dixon Brent R, Berezovski Maxim V

机构信息

Bureau of Microbial Hazards, Food Directorate, Health Canada, Ottawa, Ontario, Canada.

Department of Chemistry and Biomolecular Sciences, University of Ottawa, Ottawa, Ontario, Canada.

出版信息

PLoS One. 2015 Sep 3;10(9):e0137455. doi: 10.1371/journal.pone.0137455. eCollection 2015.

Abstract

There are currently no standard methods for the detection of Cryptosporidium spp., or other protozoan parasites, in foods, and existing methods are often inadequate, with low and variable recovery efficiencies. Food testing is difficult due to the low concentrations of parasites, the difficulty in eluting parasites from some foods, the lack of enrichment methods, and the presence of PCR inhibitors. The main objectives of the present study were to obtain DNA aptamers binding to the oocyst wall of C. parvum, and to use the aptamers to detect the presence of this parasite in foods. DNA aptamers were selected against C. parvum oocysts using SELEX (Systematic Evolution of Ligands by EXponential enrichment). Ten rounds of selection led to the discovery of 14 aptamer clones with high affinities for C. parvum oocysts. For detecting parasite-bound aptamers, a simple electrochemical sensor was employed, which used a gold nanoparticle-modified screen-printed carbon electrode. This aptasensor was fabricated by self-assembling a hybrid of a thiolated ssDNA primer and the anti- C. parvum aptamer. Square wave voltammetry was employed to quantitate C. parvum in the range of 150 to 800 oocysts, with a detection limit of approximately 100 oocysts. The high sensitivity and specificity of the developed aptasensor suggests that this novel method is very promising for the detection and identification of C. parvum oocysts on spiked fresh fruits, as compared to conventional methods such as microscopy and PCR.

摘要

目前尚无用于检测食品中隐孢子虫属或其他原生动物寄生虫的标准方法,现有方法往往存在不足,回收率低且变化不定。由于寄生虫浓度低、从某些食品中洗脱寄生虫困难、缺乏富集方法以及存在PCR抑制剂,食品检测颇具难度。本研究的主要目的是获得与微小隐孢子虫卵囊壁结合的DNA适配体,并利用这些适配体检测食品中该寄生虫的存在。使用指数富集配体系统进化技术(SELEX)针对微小隐孢子虫卵囊筛选DNA适配体。经过十轮筛选,发现了14个对微小隐孢子虫卵囊具有高亲和力的适配体克隆。为了检测与寄生虫结合的适配体,采用了一种简单的电化学传感器,该传感器使用金纳米颗粒修饰的丝网印刷碳电极。这种适配体传感器是通过自组装硫醇化单链DNA引物和抗微小隐孢子虫适配体的杂交体构建而成。采用方波伏安法对150至800个卵囊范围内的微小隐孢子虫进行定量,检测限约为100个卵囊。与显微镜检查和PCR等传统方法相比,所开发的适配体传感器的高灵敏度和特异性表明,这种新方法在检测加标新鲜水果上的微小隐孢子虫卵囊方面非常有前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9468/4559477/2aa31ef2f03f/pone.0137455.g001.jpg

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