Suppr超能文献

用于均匀(13)C标记蛋白质的魔角旋转固态核磁共振光谱的芳香族光谱编辑技术。

Aromatic spectral editing techniques for magic-angle-spinning solid-state NMR spectroscopy of uniformly (13)C-labeled proteins.

作者信息

Williams Jonathan K, Schmidt-Rohr Klaus, Hong Mei

机构信息

Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, United States.

Department of Chemistry, Brandeis University, Waltham, MA 02453, United States.

出版信息

Solid State Nucl Magn Reson. 2015 Nov;72:118-26. doi: 10.1016/j.ssnmr.2015.09.006. Epub 2015 Sep 14.

Abstract

The four aromatic amino acids in proteins, namely histidine, phenylalanine, tyrosine, and tryptophan, have strongly overlapping (13)C chemical shift ranges between 100 and 160ppm, and have so far been largely neglected in solid-state NMR determination of protein structures. Yet aromatic residues play important roles in biology through π-π and cation-π interactions. To better resolve and assign aromatic residues' (13)C signals in magic-angle-spinning (MAS) solid-state NMR spectra, we introduce two spectral editing techniques. The first method uses gated (1)H decoupling in a proton-driven spin-diffusion (PDSD) experiment to remove all protonated (13)C signals and retain only non-protonated carbon signals in the aromatic region of the (13)C spectra. The second technique uses chemical shift filters and (1)H-(13)C dipolar dephasing to selectively detect the Cα, Cβ and CO cross peaks of aromatic residues while suppressing the signals of all aliphatic residues. We demonstrate these two techniques on amino acids, a model peptide, and the microcrystalline protein GB1, and show that they significantly simplify the 2D NMR spectra and both reveal and permit the ready assignment of the aromatic residues' signals.

摘要

蛋白质中的四种芳香族氨基酸,即组氨酸、苯丙氨酸、酪氨酸和色氨酸,其(13)C化学位移范围在100至160ppm之间有很大重叠,并且迄今为止在蛋白质结构的固态核磁共振测定中基本上被忽视。然而,芳香族残基通过π-π和阳离子-π相互作用在生物学中发挥着重要作用。为了在魔角旋转(MAS)固态核磁共振谱中更好地分辨和归属芳香族残基的(13)C信号,我们引入了两种谱编辑技术。第一种方法在质子驱动自旋扩散(PDSD)实验中使用门控(1)H去耦,以去除所有质子化的(13)C信号,仅保留(13)C谱芳香区中的非质子化碳信号。第二种技术使用化学位移滤波器和(1)H-(13)C偶极去相,以选择性地检测芳香族残基的Cα、Cβ和CO交叉峰,同时抑制所有脂肪族残基的信号。我们在氨基酸、模型肽和微晶蛋白GB1上展示了这两种技术,结果表明它们显著简化了二维核磁共振谱,揭示并允许轻松归属芳香族残基的信号。

相似文献

1
Aromatic spectral editing techniques for magic-angle-spinning solid-state NMR spectroscopy of uniformly (13)C-labeled proteins.
Solid State Nucl Magn Reson. 2015 Nov;72:118-26. doi: 10.1016/j.ssnmr.2015.09.006. Epub 2015 Sep 14.
9

引用本文的文献

2
Enriched Molecular-Level View of Saline Wetland Soil Carbon by Sensitivity-Enhanced Solid-State NMR.
J Am Chem Soc. 2025 Jan 8;147(1):519-531. doi: 10.1021/jacs.4c11830. Epub 2024 Dec 19.
4
Structural properties of optically clear bacterial cellulose produced by Komagataeibacter hansenii using arabitol.
Biomater Adv. 2023 May;148:213345. doi: 10.1016/j.bioadv.2023.213345. Epub 2023 Feb 17.
5
Carbohydrate-aromatic interface and molecular architecture of lignocellulose.
Nat Commun. 2022 Jan 27;13(1):538. doi: 10.1038/s41467-022-28165-3.
6
Solid-State NMR Investigations of Extracellular Matrixes and Cell Walls of Algae, Bacteria, Fungi, and Plants.
Chem Rev. 2022 May 25;122(10):10036-10086. doi: 10.1021/acs.chemrev.1c00669. Epub 2021 Dec 8.
7
De novo resonance assignment of the transmembrane domain of LR11/SorLA in E. coli membranes.
J Magn Reson. 2020 Jan;310:106639. doi: 10.1016/j.jmr.2019.106639. Epub 2019 Nov 1.
8
Lignin-polysaccharide interactions in plant secondary cell walls revealed by solid-state NMR.
Nat Commun. 2019 Jan 21;10(1):347. doi: 10.1038/s41467-018-08252-0.
9
Direct amide N to C transfers for solid-state assignment experiments in deuterated proteins.
J Biomol NMR. 2018 Oct;72(1-2):69-78. doi: 10.1007/s10858-018-0207-0. Epub 2018 Sep 11.
10
Structure and Dynamics of Membrane Proteins from Solid-State NMR.
Annu Rev Biophys. 2018 May 20;47:201-222. doi: 10.1146/annurev-biophys-070816-033712. Epub 2018 Mar 2.

本文引用的文献

1
Chemical ligation of the influenza M2 protein for solid-state NMR characterization of the cytoplasmic domain.
Protein Sci. 2015 Jul;24(7):1087-99. doi: 10.1002/pro.2690. Epub 2015 May 27.
4
Pf1 bacteriophage hydration by magic angle spinning solid-state NMR.
J Chem Phys. 2014 Dec 14;141(22):22D533. doi: 10.1063/1.4903230.
5
Resonance assignment of the NMR spectra of disordered proteins using a multi-objective non-dominated sorting genetic algorithm.
J Biomol NMR. 2013 Nov;57(3):281-96. doi: 10.1007/s10858-013-9788-9. Epub 2013 Oct 17.
6
Conformational analysis of the full-length M2 protein of the influenza A virus using solid-state NMR.
Protein Sci. 2013 Nov;22(11):1623-38. doi: 10.1002/pro.2368. Epub 2013 Oct 7.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验