Zhang Jinglou, Kim Yeon-Ju, Hoang Van-An, Lan Nguyen Ngoc, Wang Chao, Kang Jong-Pyo, Wang Dandan, Yang Deok-Chun
Graduate School of Biotechnology, Ginseng Genetic Resource Bank, College of Life Science, Kyung Hee University, Yongin, 446-701, Republic of Korea.
Department of Oriental Medicinal Biotechnology, College of Life Science, Kyung-Hee University, Seocheon-dong, Giheung-gu, Yongin-si, Gyeonggi-do 446-701, Republic of Korea.
Int J Syst Evol Microbiol. 2016 Jan;66(1):56-61. doi: 10.1099/ijsem.0.000669. Epub 2015 Oct 8.
A Gram-stain-negative, rod-shaped bacterium, designated DCY83T, was isolated from soil of a ginseng field in Gwangju Province, Republic of Korea. Cells were motile by means of flagella. Growth occurred at 4-40 °C (optimum 30 °C), at pH 6-8 (optimum pH 7.0) and with ≤ 0.4 % NaCl. Strain DCY83T was able to produce siderophore and was positive for phosphate solubilization. Indole-3-acetic acid production was 12.9 μg ml- 1 after 3 days in culture. 16S rRNA gene sequence analysis showed that strain DCY83T belonged to the genus Duganella and was related most closely to Duganella sacchari Sac-22T (97.4 % similarity), Duganella zoogloeoides IAM 12670T (97.1 %) and Duganella radicis Sac-41T (97.1 %). The major fatty acids were C16 : 0 and summed feature 3 (containing C16 : 1ω7c and/or C16 : 1ω6c). The major polar lipids were phosphatidylglycerol and phosphatidylethanolamine. The only quinone was ubiquinone 8. The genomic DNA G+C content was 55.3 mol%. DNA-DNA relatedness between strain DCY83T and D. sacchari KCTC 22381T, D. zoogloeoides JCM 20729T and D. radicis KCTC 22382T was 27.7, 22.4 and 35.5 %, respectively. On the basis of the phenotypic and genotypic analysis, DCY83T is classified as representing a novel species in the genus Duganella, for which the name Duganella ginsengisoli sp. nov. is proposed. The type strain is DCY83T ( = KCTC 42409T = JCM 30745T).
从韩国光州省人参田土壤中分离出一株革兰氏阴性、杆状细菌,命名为DCY83T。细胞通过鞭毛运动。在4-40°C(最适温度30°C)、pH 6-8(最适pH 7.0)和NaCl浓度≤0.4%的条件下生长。菌株DCY83T能够产生铁载体,且解磷呈阳性。培养3天后,吲哚-3-乙酸产量为12.9μg ml-1。16S rRNA基因序列分析表明,菌株DCY83T属于杜氏菌属,与蔗糖杜氏菌Sac-22T(相似度97.4%)、动胶杜氏菌IAM 12670T(97.1%)和根际杜氏菌Sac-41T(97.1%)亲缘关系最密切。主要脂肪酸为C16:0和总和特征3(包含C16:1ω7c和/或C16:1ω6c)。主要极性脂为磷脂酰甘油和磷脂酰乙醇胺。唯一的醌为泛醌8。基因组DNA G+C含量为55.3mol%。菌株DCY83T与蔗糖杜氏菌KCTC 22381T、动胶杜氏菌JCM 20729T和根际杜氏菌KCTC 22382T之间的DNA-DNA相关性分别为27.7%、22.4%和35.5%。基于表型和基因型分析,DCY83T被分类为杜氏菌属中的一个新物种,为此提出人参土杜氏菌(Duganella ginsengisoli sp. nov.)的名称。模式菌株为DCY83T(=KCTC 42409T=JCM 30745T)。