• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单分子光谱揭示了酶促电子传递中的隐藏状态。

Single-molecule spectroscopy exposes hidden states in an enzymatic electron relay.

作者信息

Grossman Iris, Yuval Aviram Haim, Armony Gad, Horovitz Amnon, Hofmann Hagen, Haran Gilad, Fass Deborah

机构信息

Department of Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.

Department of Chemical Physics, Weizmann Institute of Science, Rehovot 7610001, Israel.

出版信息

Nat Commun. 2015 Oct 15;6:8624. doi: 10.1038/ncomms9624.

DOI:10.1038/ncomms9624
PMID:26468675
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4634331/
Abstract

The ability to query enzyme molecules individually is transforming our view of catalytic mechanisms. Quiescin sulfhydryl oxidase (QSOX) is a multidomain catalyst of disulfide-bond formation that relays electrons from substrate cysteines through two redox-active sites to molecular oxygen. The chemical steps in electron transfer have been delineated, but the conformational changes accompanying these steps are poorly characterized. Here we use single-molecule Förster resonance energy transfer (smFRET) to probe QSOX conformation in resting and cycling enzyme populations. We report the discovery of unanticipated roles for conformational changes in QSOX beyond mediating electron transfer between redox-active sites. In particular, a state of the enzyme not previously postulated or experimentally detected is shown to gate, via a conformational transition, the entrance into a sub-cycle within an expanded QSOX kinetic scheme. By tightly constraining mechanistic models, smFRET data can reveal the coupling between conformational and chemical transitions in complex enzymatic cycles.

摘要

对酶分子进行逐个查询的能力正在改变我们对催化机制的看法。巯基氧化酶(QSOX)是一种形成二硫键的多结构域催化剂,它将电子从底物半胱氨酸通过两个氧化还原活性位点传递给分子氧。电子转移的化学步骤已被阐明,但伴随这些步骤的构象变化却鲜有描述。在这里,我们使用单分子荧光共振能量转移(smFRET)来探测处于静止和循环状态的酶群体中的QSOX构象。我们报告了QSOX构象变化在介导氧化还原活性位点之间的电子转移之外的意外作用。特别是,一种以前未被假设或实验检测到的酶状态被证明通过构象转变控制着进入扩展的QSOX动力学方案中的一个子循环。通过严格限制机制模型,smFRET数据可以揭示复杂酶循环中构象和化学转变之间的耦合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/0cdc9cd0a499/ncomms9624-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/43908bbd322f/ncomms9624-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/6a6b25665d3a/ncomms9624-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/663ede646964/ncomms9624-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/b73ebbed21eb/ncomms9624-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/0cdc9cd0a499/ncomms9624-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/43908bbd322f/ncomms9624-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/6a6b25665d3a/ncomms9624-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/663ede646964/ncomms9624-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/b73ebbed21eb/ncomms9624-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c19/4634331/0cdc9cd0a499/ncomms9624-f5.jpg

相似文献

1
Single-molecule spectroscopy exposes hidden states in an enzymatic electron relay.单分子光谱揭示了酶促电子传递中的隐藏状态。
Nat Commun. 2015 Oct 15;6:8624. doi: 10.1038/ncomms9624.
2
Quiescin sulfhydryl oxidase from Trypanosoma brucei: catalytic activity and mechanism of a QSOX family member with a single thioredoxin domain.布氏锥虫的硫氧还蛋白谷胱甘肽氧化酶:具有单个硫氧还蛋白结构域的 QSOX 家族成员的催化活性和机制。
Biochemistry. 2010 Mar 9;49(9):2075-85. doi: 10.1021/bi902222s.
3
Going through the barrier: coupled disulfide exchange reactions promote efficient catalysis in quiescin sulfhydryl oxidase.穿越障碍:二硫键交换反应促进休眠硫氧还蛋白氧化酶的有效催化。
J Biol Chem. 2014 Feb 21;289(8):5274-84. doi: 10.1074/jbc.M113.536219. Epub 2013 Dec 30.
4
Phylogenetics and enzymology of plant quiescin sulfhydryl oxidase.植物休眠硫氧还蛋白氧化酶的系统发生和酶学特性。
FEBS Lett. 2012 Nov 30;586(23):4119-25. doi: 10.1016/j.febslet.2012.10.003. Epub 2012 Oct 12.
5
Diversification of quiescin sulfhydryl oxidase in a preserved framework for redox relay.在保留氧化还原接力框架的情况下,使休眠巯基氧化酶多样化。
BMC Evol Biol. 2013 Mar 19;13:70. doi: 10.1186/1471-2148-13-70.
6
QSOX contains a pseudo-dimer of functional and degenerate sulfhydryl oxidase domains.QSOX 包含一个功能性和简并硫氧还蛋白氧化酶结构域的伪二聚体。
FEBS Lett. 2010 Apr 16;584(8):1521-5. doi: 10.1016/j.febslet.2010.03.001. Epub 2010 Mar 6.
7
Protein substrate discrimination in the quiescin sulfhydryl oxidase (QSOX) family.在 QSOX 家族中蛋白质底物的识别。
Biochemistry. 2012 May 22;51(20):4226-35. doi: 10.1021/bi300394w. Epub 2012 May 14.
8
Erv2 and quiescin sulfhydryl oxidases: Erv-domain enzymes associated with the secretory pathway.Erv2 和 quiescin 巯基氧化酶:与分泌途径相关的 Erv 结构域酶。
Antioxid Redox Signal. 2012 Apr 15;16(8):800-8. doi: 10.1089/ars.2011.4450. Epub 2012 Jan 11.
9
Crucial effect of the first CXXC motif of human QSOX 1b on the activity to different substrates.人 QSOX1b 第一个 CXXC 基序对不同底物活性的关键影响。
J Biochem. 2011 Mar;149(3):293-300. doi: 10.1093/jb/mvq143. Epub 2010 Dec 9.
10
Avian sulfhydryl oxidase is not a metalloenzyme: adventitious binding of divalent metal ions to the enzyme.禽源巯基氧化酶不是金属酶:二价金属离子与该酶的偶然结合。
Biochemistry. 2003 Sep 23;42(37):11074-82. doi: 10.1021/bi0301385.

引用本文的文献

1
Single-Molecule FRET of Membrane Transport Proteins.膜转运蛋白的单分子 FRET
Chembiochem. 2021 Sep 2;22(17):2657-2671. doi: 10.1002/cbic.202100106. Epub 2021 May 21.
2
Membrane Chemistry Tunes the Structure of a Peptide Transporter.膜化学调节肽转运蛋白的结构。
Angew Chem Int Ed Engl. 2020 Oct 19;59(43):19121-19128. doi: 10.1002/anie.202008226. Epub 2020 Sep 11.
3
cis-Proline mutants of quiescin sulfhydryl oxidase 1 with altered redox properties undermine extracellular matrix integrity and cell adhesion in fibroblast cultures.

本文引用的文献

1
The energy landscape of adenylate kinase during catalysis.催化过程中腺苷酸激酶的能量态势
Nat Struct Mol Biol. 2015 Feb;22(2):124-31. doi: 10.1038/nsmb.2941. Epub 2015 Jan 12.
2
Enzyme structure captures four cysteines aligned for disulfide relay.酶结构捕获了四个用于二硫键中继排列的半胱氨酸。
Protein Sci. 2014 Aug;23(8):1102-12. doi: 10.1002/pro.2496. Epub 2014 Jun 18.
3
Disulfide bond generation in mammalian blood serum: detection and purification of quiescin-sulfhydryl oxidase.哺乳动物血清中二硫键的生成:潜硫氧还蛋白-巯基氧化酶的检测与纯化。
静息素硫氧还蛋白氧化酶 1 的顺式脯氨酸突变体改变了其氧化还原性质,破坏了成纤维细胞培养物中的细胞外基质完整性和细胞黏附。
Protein Sci. 2019 Jan;28(1):228-238. doi: 10.1002/pro.3537.
4
Slow domain reconfiguration causes power-law kinetics in a two-state enzyme.慢的结构域重排导致两态酶的幂律动力学。
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):513-518. doi: 10.1073/pnas.1714401115. Epub 2018 Jan 3.
5
Chemistry and Enzymology of Disulfide Cross-Linking in Proteins.蛋白质中二硫键交联的化学与酶学。
Chem Rev. 2018 Feb 14;118(3):1169-1198. doi: 10.1021/acs.chemrev.7b00123. Epub 2017 Jul 12.
Free Radic Biol Med. 2014 Apr;69:129-35. doi: 10.1016/j.freeradbiomed.2014.01.020. Epub 2014 Jan 25.
4
Going through the barrier: coupled disulfide exchange reactions promote efficient catalysis in quiescin sulfhydryl oxidase.穿越障碍:二硫键交换反应促进休眠硫氧还蛋白氧化酶的有效催化。
J Biol Chem. 2014 Feb 21;289(8):5274-84. doi: 10.1074/jbc.M113.536219. Epub 2013 Dec 30.
5
A secreted disulfide catalyst controls extracellular matrix composition and function.一种分泌的二硫键催化剂控制细胞外基质的组成和功能。
Science. 2013 Jul 5;341(6141):74-6. doi: 10.1126/science.1238279. Epub 2013 May 23.
6
A toolkit and benchmark study for FRET-restrained high-precision structural modeling.用于 FRET 约束高精度结构建模的工具包和基准研究。
Nat Methods. 2012 Dec;9(12):1218-25. doi: 10.1038/nmeth.2222. Epub 2012 Nov 11.
7
Protein folding drives disulfide formation.蛋白质折叠驱动二硫键形成。
Cell. 2012 Nov 9;151(4):794-806. doi: 10.1016/j.cell.2012.09.036.
8
Kinetics and mechanisms of thiol-disulfide exchange covering direct substitution and thiol oxidation-mediated pathways.巯基-二硫键交换的动力学和机制,涵盖直接取代和巯基氧化介导的途径。
Antioxid Redox Signal. 2013 May 1;18(13):1623-41. doi: 10.1089/ars.2012.4973. Epub 2013 Jan 9.
9
The enigmatic reaction of flavins with oxygen.黄素与氧气的神秘反应。
Trends Biochem Sci. 2012 Sep;37(9):373-80. doi: 10.1016/j.tibs.2012.06.005. Epub 2012 Jul 20.
10
The dynamic disulphide relay of quiescin sulphydryl oxidase.谷胱甘肽巯基氧化酶的动态二硫键中继器。
Nature. 2012 Aug 16;488(7411):414-8. doi: 10.1038/nature11267.