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新种土壤德沃斯氏菌,从红松(Pinus koraiensis)园土壤中分离得到。

Devosia humi sp. nov., isolated from soil of a Korean pine (Pinus koraiensis) garden.

作者信息

Du Juan, Kook MooChang, Akter Shahina, Singh Hina, Won KyungHwa, Ngo Hien T T, Yi Tae-Hoo

机构信息

Department of Oriental Medicinal Material & Processing, College of Life Science, Kyung Hee University Global Campus, 1732 Deokyoungdaero, Giheung-gu, Yongin-si, Gyeonggi-do, 446-701, Republic of Korea.

Department of Marine Biotechnology, Anyang University, Incheon 417-833, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2016 Jan;66(1):341-346. doi: 10.1099/ijsem.0.000724. Epub 2015 Oct 28.

DOI:10.1099/ijsem.0.000724
PMID:26514816
Abstract

A bacterial isolate, designated strain THG-MM1T, was isolated from soil in Yongin region, Republic of Korea. Strain THG-MM1T was Gram-stain-negative, aerobic, non-motile and rod-shaped. Based on 16S rRNA gene sequence comparisons, strain THG-MM1T was most closely related to Devosia insulae DS-56T (96.5 % 16S rRNA gene sequence similarity), followed by Devosia yakushimensis Yak96BT (95.7 %) and Devosia albogilva IPL15T (95.2 %). The G+C content of the genomic DNA was 63.7 mol%. The major cellular fatty acids were C16 : 0, summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and C18 : 0. The predominant isoprenoid quinone was ubiquinone-10 (Q-10). The major polar lipids were phosphatidylglycerol and an unidentified lipid. The combined phenotypic, chemotaxonomic and phylogenetic data showed that strain THG-MM1T represents a novel species of the genus Devosia, for which the name Devosia humi sp. nov. is proposed, with strain THG-MM1T ( = KACC 18281T = CCTCC AB 2015121T) as the type strain.

摘要

从韩国龙仁地区土壤中分离出一株细菌,命名为THG-MM1T菌株。THG-MM1T菌株革兰氏染色阴性,好氧,无运动性,呈杆状。基于16S rRNA基因序列比较,THG-MM1T菌株与岛屿德沃斯氏菌DS-56T(16S rRNA基因序列相似性为96.5%)关系最为密切,其次是屋久岛德沃斯氏菌Yak96BT(95.7%)和白吉尔德沃斯氏菌IPL15T(95.2%)。基因组DNA的G+C含量为63.7mol%。主要细胞脂肪酸为C16 : 0、总和特征8(C18 : 1ω7c和/或C18 : 1ω6c)和C18 : 0。主要类异戊二烯醌为泛醌-10(Q-10)。主要极性脂为磷脂酰甘油和一种未鉴定的脂类。综合表型、化学分类和系统发育数据表明,THG-MM1T菌株代表德沃斯氏菌属的一个新物种,为此提出名为土壤德沃斯氏菌(Devosia humi)的新种,以THG-MM1T菌株(=KACC 18281T = CCTCC AB 2015121T)作为模式菌株。

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