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通过稳健的细胞分割和哈希技术实现高通量组织病理学图像分析。

High-throughput histopathological image analysis via robust cell segmentation and hashing.

作者信息

Zhang Xiaofan, Xing Fuyong, Su Hai, Yang Lin, Zhang Shaoting

机构信息

Department of Computer Science, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.

Department of Electrical and Computer Engineering, University of Florida, Gainesville, FL 32611, USA.

出版信息

Med Image Anal. 2015 Dec;26(1):306-15. doi: 10.1016/j.media.2015.10.005. Epub 2015 Nov 9.

Abstract

Computer-aided diagnosis of histopathological images usually requires to examine all cells for accurate diagnosis. Traditional computational methods may have efficiency issues when performing cell-level analysis. In this paper, we propose a robust and scalable solution to enable such analysis in a real-time fashion. Specifically, a robust segmentation method is developed to delineate cells accurately using Gaussian-based hierarchical voting and repulsive balloon model. A large-scale image retrieval approach is also designed to examine and classify each cell of a testing image by comparing it with a massive database, e.g., half-million cells extracted from the training dataset. We evaluate this proposed framework on a challenging and important clinical use case, i.e., differentiation of two types of lung cancers (the adenocarcinoma and squamous carcinoma), using thousands of lung microscopic tissue images extracted from hundreds of patients. Our method has achieved promising accuracy and running time by searching among half-million cells .

摘要

组织病理学图像的计算机辅助诊断通常需要检查所有细胞以进行准确诊断。传统的计算方法在进行细胞水平分析时可能存在效率问题。在本文中,我们提出了一种强大且可扩展的解决方案,以实现实时的此类分析。具体而言,开发了一种强大的分割方法,使用基于高斯的分层投票和排斥气球模型来准确描绘细胞。还设计了一种大规模图像检索方法,通过将测试图像的每个细胞与海量数据库(例如从训练数据集中提取的五十万个细胞)进行比较,来对其进行检查和分类。我们使用从数百名患者中提取的数千张肺显微组织图像,在一个具有挑战性且重要的临床用例上评估了这个提出的框架,即区分两种类型的肺癌(腺癌和鳞状细胞癌)。通过在五十万个细胞中进行搜索,我们的方法在准确性和运行时间方面取得了可观的成果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b49/4679540/34945d5211e5/nihms-736092-f0001.jpg

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