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焦磷酸测序揭示了中国生物电化学系统中阳极细菌生物膜的核心群落。

Pyrosequencing Reveals a Core Community of Anodic Bacterial Biofilms in Bioelectrochemical Systems from China.

作者信息

Xiao Yong, Zheng Yue, Wu Song, Zhang En-Hua, Chen Zheng, Liang Peng, Huang Xia, Yang Zhao-Hui, Ng I-Son, Chen Bor-Yann, Zhao Feng

机构信息

Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences Xiamen, China.

Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of SciencesXiamen, China; College of Environmental Science and Engineering, Hunan UniversityChangsha, China.

出版信息

Front Microbiol. 2015 Dec 16;6:1410. doi: 10.3389/fmicb.2015.01410. eCollection 2015.

Abstract

Bioelectrochemical systems (BESs) are promising technologies for energy and product recovery coupled with wastewater treatment, and the core microbial community in electrochemically active biofilm in BESs remains controversy. In the present study, 7 anodic communities from 6 bioelectrochemical systems in 4 labs in southeast, north and south-central of China are explored by 454 pyrosequencing. A total of 251,225 effective sequences are obtained for 7 electrochemically active biofilm samples at 3% cutoff level. While Alpha-, Beta-, and Gamma-proteobacteria are the most abundant classes (averaging 16.0-17.7%), Bacteroidia and Clostridia are the two sub-dominant and commonly shared classes. Six commonly shared genera i.e., Azospira, Azospirillum, Acinetobacter, Bacteroides, Geobacter, Pseudomonas, and Rhodopseudomonas dominate the electrochemically active communities and are defined as core genera. A total of 25 OTUs with average relative abundance >0.5% were selected and designated as core OTUs, and some species relating to these OTUs have been reported electrochemically active. Furthermore, cyclic voltammetry and chronoamperometry tests show that two strains from Acinetobacter guillouiae and Stappia indica, bacteria relate to two core OTUs, are electrochemically active. Using randomly selected bioelectrochemical systems, the study has presented extremely diverse bacterial communities in anodic biofilms, though, we still can suggest some potentially microbes for investigating the electrochemical mechanisms in bioelectrochemical systems.

摘要

生物电化学系统(BESs)是用于能源回收、产品回收以及废水处理的有前景的技术,而BESs中电化学活性生物膜的核心微生物群落仍存在争议。在本研究中,通过454焦磷酸测序技术对来自中国东南部、北部和中南部4个实验室的6个生物电化学系统中的7个阳极群落进行了探索。在3%的截止水平下,共获得了7个电化学活性生物膜样品的251,225条有效序列。虽然α-、β-和γ-变形菌是最丰富的类群(平均占16.0 - 17.7%),但拟杆菌纲和梭菌纲是两个次优势且常见的类群。6个常见的共有属,即固氮螺旋菌属、固氮螺菌属、不动杆菌属、拟杆菌属、地杆菌属、假单胞菌属和红假单胞菌属,主导着电化学活性群落,并被定义为核心属。共选择了25个平均相对丰度>0.5%的OTU并指定为核心OTU,并且已经报道了一些与这些OTU相关的物种具有电化学活性。此外,循环伏安法和计时电流法测试表明,来自吉氏不动杆菌和印度斯塔皮亚菌的两株细菌(与两个核心OTU相关)具有电化学活性。通过随机选择生物电化学系统,该研究展示了阳极生物膜中极其多样的细菌群落,不过,我们仍然可以提出一些潜在的微生物用于研究生物电化学系统中的电化学机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3654/4679932/7352799cedbd/fmicb-06-01410-g0001.jpg

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