• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

马赛微小病毒新种,具有最大基因组的人体共生菌。

Microvirga massiliensis sp. nov., the human commensal with the largest genome.

作者信息

Caputo Aurélia, Lagier Jean-Christophe, Azza Saïd, Robert Catherine, Mouelhi Donia, Fournier Pierre-Edouard, Raoult Didier

机构信息

Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes, CNRS, UMR 7278 - IRD 198, Faculté de médecine, Aix-Marseille Université, 27 Boulevard Jean Moulin, 13385, Marseille Cedex 05, France.

Special Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.

出版信息

Microbiologyopen. 2016 Apr;5(2):307-22. doi: 10.1002/mbo3.329. Epub 2016 Jan 8.

DOI:10.1002/mbo3.329
PMID:26749561
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4831475/
Abstract

Microvirga massiliensis sp. nov. strain JC119(T) is a bacteria isolated in Marseille from a stool sample collected in Senegal. The 16S rRNA (JF824802) of M. massiliensis JC119(T) revealed 95% sequence identity with Microvirga lotononidis WSM3557(T) (HM362432). This bacterium is aerobic, gram negative, catalase positive, and oxidase negative. The draft genome of M. massiliensis JC119(T) comprises a 9,207,211-bp-long genome that is the largest bacterial genome of an isolate in humans. The genome exhibits a G+C content of 63.28% and contains 8685 protein-coding genes and 77 RNA genes, including 21 rRNA genes. Here, we describe the features of M. massiliensis JC119(T), together with the genome sequence information and its annotation.

摘要

马赛微小杆菌新种菌株JC119(T)是从塞内加尔采集的一份粪便样本中分离得到的细菌,分离地点在马赛。马赛微小杆菌JC119(T)的16S rRNA(JF824802)与洛托诺迪微小杆菌WSM3557(T)(HM362432)的序列同一性为95%。该细菌为需氧菌,革兰氏阴性,过氧化氢酶阳性,氧化酶阴性。马赛微小杆菌JC119(T)的基因组草图包含一个长度为9,207,211 bp的基因组,是人类分离株中最大的细菌基因组。该基因组的G+C含量为63.28%,包含8685个蛋白质编码基因和77个RNA基因,其中包括21个rRNA基因。在此,我们描述了马赛微小杆菌JC119(T)的特征,以及基因组序列信息及其注释。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/b70e92a254d0/MBO3-5-307-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/fbf77f22c76d/MBO3-5-307-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/f0112c37f788/MBO3-5-307-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/e3400f0e43e0/MBO3-5-307-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/fe08789ec03d/MBO3-5-307-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/b70e92a254d0/MBO3-5-307-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/fbf77f22c76d/MBO3-5-307-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/f0112c37f788/MBO3-5-307-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/e3400f0e43e0/MBO3-5-307-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/fe08789ec03d/MBO3-5-307-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25c4/4831475/b70e92a254d0/MBO3-5-307-g005.jpg

相似文献

1
Microvirga massiliensis sp. nov., the human commensal with the largest genome.马赛微小病毒新种,具有最大基因组的人体共生菌。
Microbiologyopen. 2016 Apr;5(2):307-22. doi: 10.1002/mbo3.329. Epub 2016 Jan 8.
2
Microbial Culturomics Application for Global Health: Noncontiguous Finished Genome Sequence and Description of Pseudomonas massiliensis Strain CB-1 sp. nov. in Brazil.微生物培养组学在全球健康中的应用:巴西产假单胞菌菌株 CB-1 种的非连续完成基因组序列和描述。
OMICS. 2018 Feb;22(2):164-175. doi: 10.1089/omi.2017.0027. Epub 2017 Jun 26.
3
Noncontiguous finished genome sequence and description of Raoultibacter massiliensis gen. nov., sp. nov. and Raoultibacter timonensis sp. nov, two new bacterial species isolated from the human gut.非连续完成的基因组序列和 Raoultibacter massiliensis 属。nov.,sp。nov.和 Raoultibacter timonensis sp。nov 的描述,两种从人类肠道中分离出来的新细菌物种。
Microbiologyopen. 2019 Jun;8(6):e00758. doi: 10.1002/mbo3.758. Epub 2019 Jan 30.
4
Rise of Microbial Culturomics: Noncontiguous Finished Genome Sequence and Description of Beduini massiliensis gen. nov., sp. nov.微生物培养组学的兴起:不连续完成的贝杜伊尼马赛利亚菌基因组序列及描述,贝杜伊尼马赛利亚菌属,新种
OMICS. 2015 Dec;19(12):766-76. doi: 10.1089/omi.2015.0143.
5
Blautia massiliensis sp. nov., isolated from a fresh human fecal sample and emended description of the genus Blautia.马西利亚布劳特氏菌新种,从新鲜人类粪便样本中分离得到及布劳特氏菌属的修订描述
Anaerobe. 2017 Feb;43:47-55. doi: 10.1016/j.anaerobe.2016.12.001. Epub 2016 Dec 5.
6
Description of Mediterraneibacter massiliensis, gen. nov., sp. nov., a new genus isolated from the gut microbiota of an obese patient and reclassification of Ruminococcus faecis, Ruminococcus lactaris, Ruminococcus torques, Ruminococcus gnavus and Clostridium glycyrrhizinilyticum as Mediterraneibacter faecis comb. nov., Mediterraneibacter lactaris comb. nov., Mediterraneibacter torques comb. nov., Mediterraneibacter gnavus comb. nov. and Mediterraneibacter glycyrrhizinilyticus comb. nov.马西利亚地中海杆菌的描述,新属,新种,从一名肥胖患者的肠道微生物群中分离出的新属,以及将粪便瘤胃球菌、乳酸瘤胃球菌、扭链瘤胃球菌、纤细瘤胃球菌和甘草酸解梭菌重新分类为粪便地中海杆菌、乳酸地中海杆菌、扭链地中海杆菌、纤细地中海杆菌和甘草酸解地中海杆菌。
Antonie Van Leeuwenhoek. 2018 Nov;111(11):2107-2128. doi: 10.1007/s10482-018-1104-y. Epub 2018 May 31.
7
Draft Genome and Description of Eisenbergiella massiliensis Strain AT11: A New Species Isolated from Human Feces After Bariatric Surgery.马西利艾森伯格菌菌株AT11的基因组草图及描述:一种在减肥手术后从人类粪便中分离出的新物种
Curr Microbiol. 2018 Oct;75(10):1274-1281. doi: 10.1007/s00284-018-1520-2. Epub 2018 Jun 1.
8
Draft genome and description of Negativicoccus massiliensis strain Marseille-P2082, a new species isolated from the gut microbiota of an obese patient.马赛-P2082 株的基因组草案和描述,一种从肥胖患者肠道微生物群中分离得到的新物种。
Antonie Van Leeuwenhoek. 2020 Jul;113(7):997-1008. doi: 10.1007/s10482-020-01414-5. Epub 2020 Apr 17.
9
Genome sequence and description of Gracilibacillus timonensis sp. nov. strain Marseille-P2481 , a moderate halophilic bacterium isolated from the human gut microflora.温和嗜盐菌马赛- P2481 菌株的基因组序列和描述,该菌从人体肠道微生物群中分离得到。
Microbiologyopen. 2019 Feb;8(2):e00638. doi: 10.1002/mbo3.638. Epub 2018 Apr 19.
10
Microvirga lupini sp. nov., Microvirga lotononidis sp. nov. and Microvirga zambiensis sp. nov. are alphaproteobacterial root-nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts.微杆菌属 lupini 新种、微杆菌属 lotononidis 新种和微杆菌属 zambiensis 新种是α变形菌根瘤菌,它们与地理上和分类上分离的豆科宿主特异性结瘤和固氮。
Int J Syst Evol Microbiol. 2012 Nov;62(Pt 11):2579-2588. doi: 10.1099/ijs.0.035097-0. Epub 2011 Dec 23.

引用本文的文献

1
sp. nov. and sp. nov., Pink-Pigmented Bacteria Isolated from Root Nodules of (Retz.) Poir.新种及新种,从(Retz.)Poir.的根瘤中分离出的粉色色素细菌
Microorganisms. 2024 Jul 30;12(8):1558. doi: 10.3390/microorganisms12081558.
2
Reclassification of Botryococcus braunii chemical races into separate species based on a comparative genomics analysis.基于比较基因组学分析,对柏油球藻化学型进行重新分类,划分为独立的种。
PLoS One. 2024 Jul 29;19(7):e0304144. doi: 10.1371/journal.pone.0304144. eCollection 2024.
3
Suppression of predominant interfering bacteria in the purification process of myxobacteria.

本文引用的文献

1
List of new names and new combinations previously effectively, but not validly, published.先前已有效发表但未合法发表的新名称和新组合列表。
Int J Syst Evol Microbiol. 2017 Jan;67(1):1-3. doi: 10.1099/ijsem.0.001733.
2
The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota.以 culturomics 为例,通过研究人类肠道微生物群来实现微生物学文化的复兴。
Clin Microbiol Rev. 2015 Jan;28(1):237-64. doi: 10.1128/CMR.00014-14.
3
Draft Genome Sequence of Microvirga sp. Strain BSC39, Isolated from Biological Soil Crust of Moab, Utah.
粘细菌纯化过程中主要干扰细菌的抑制
Iran J Microbiol. 2022 Oct;14(5):721-729. doi: 10.18502/ijm.v14i5.10968.
4
Microvirga terricola sp. nov. and Microvirga solisilvae sp. nov, isolated from forest soil.土壤微杆菌属新种和林地微杆菌属新种,从森林土壤中分离得到。
Arch Microbiol. 2022 Jun 24;204(7):423. doi: 10.1007/s00203-022-02963-1.
5
Comprehensive Comparative Genomics and Phenotyping of Species.物种的综合比较基因组学与表型分析
Front Microbiol. 2021 Oct 6;12:740610. doi: 10.3389/fmicb.2021.740610. eCollection 2021.
6
Description and genome analysis of Microvirga antarctica sp. nov., a novel pink-pigmented psychrotolerant bacterium isolated from Antarctic soil.描述并分析南极微小杆菌的基因组,这是一种从南极土壤中分离出来的新型粉红着色耐冷细菌。
Antonie Van Leeuwenhoek. 2021 Dec;114(12):2219-2228. doi: 10.1007/s10482-021-01674-9. Epub 2021 Oct 25.
7
Draft genome and description of strain Marseille-Q2068T sp. nov., a new bacterium isolated from human healthy skin.从人类健康皮肤分离出的新细菌马赛-Q2068T菌株的基因组草图及描述
New Microbes New Infect. 2021 Jan 15;40:100839. doi: 10.1016/j.nmni.2021.100839. eCollection 2021 Mar.
8
Isolation and Identification of HR1, a Novel Thermo-Tolerant Bacterium, and Comparative Genomics among Species.新型耐热细菌HR1的分离与鉴定及种间比较基因组学
Microorganisms. 2020 Jan 10;8(1):101. doi: 10.3390/microorganisms8010101.
9
Genome Insights into the Novel Species , a Rapeseed Endophyte with Biotechnological Potential.对一种具有生物技术潜力的新型油菜内生菌的基因组洞察。
Microorganisms. 2019 Sep 14;7(9):354. doi: 10.3390/microorganisms7090354.
10
Genome and pan-genome analysis to classify emerging bacteria.基因组和泛基因组分析用于分类新兴细菌。
Biol Direct. 2019 Feb 26;14(1):5. doi: 10.1186/s13062-019-0234-0.
从犹他州摩押生物土壤结皮中分离出的微小病毒属菌株BSC39的基因组序列草图
Genome Announc. 2014 Nov 13;2(6):e01197-14. doi: 10.1128/genomeA.01197-14.
4
Genome sequence of Microvirga lupini strain LUT6(T), a novel Lupinus alphaproteobacterial microsymbiont from Texas.羽扇豆微枝形杆菌LUT6(T)菌株的基因组序列,一种来自德克萨斯州的新型羽扇豆α-变形菌微共生体。
Stand Genomic Sci. 2014 Mar 1;9(3):1159-67. doi: 10.4056/sigs.5249382. eCollection 2014 Jun 15.
5
Culturomics and pyrosequencing evidence of the reduction in gut microbiota diversity in patients with broad-spectrum antibiotics.广谱抗生素治疗后患者肠道微生物多样性减少的文化组学和焦磷酸测序证据
Int J Antimicrob Agents. 2014 Aug;44(2):117-24. doi: 10.1016/j.ijantimicag.2014.04.020. Epub 2014 Jun 14.
6
Large-scale genomic analysis suggests a neutral punctuated dynamics of transposable elements in bacterial genomes.大规模基因组分析表明,转座元件在细菌基因组中具有中性的间断性动态变化。
PLoS Comput Biol. 2014 Jun 26;10(6):e1003680. doi: 10.1371/journal.pcbi.1003680. eCollection 2014 Jun.
7
Dramatic reduction of culture time of Mycobacterium tuberculosis.结核分枝杆菌培养时间的大幅缩短。
Sci Rep. 2014 Feb 28;4:4236. doi: 10.1038/srep04236.
8
Microvirga vignae sp. nov., a root nodule symbiotic bacterium isolated from cowpea grown in semi-arid Brazil.微杆菌属 vignae 新种,一种从生长在巴西半干旱地区的豇豆根瘤中分离得到的共生细菌。
Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):725-730. doi: 10.1099/ijs.0.053082-0. Epub 2013 Oct 31.
9
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.
10
Development of the EUCAST disk diffusion antimicrobial susceptibility testing method and its implementation in routine microbiology laboratories.EUCAST 纸片扩散法抗菌药物敏感性测试方法的制定及其在常规微生物学实验室中的应用。
Clin Microbiol Infect. 2014 Apr;20(4):O255-66. doi: 10.1111/1469-0691.12373. Epub 2013 Oct 17.