Chen Bisi, Niu Fangfang, Liu Wu-Zhen, Yang Bo, Zhang Jingxiao, Ma Jieyu, Cheng Hao, Han Feng, Jiang Yuan-Qing
State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China.
State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China
DNA Res. 2016 Apr;23(2):101-14. doi: 10.1093/dnares/dsv040. Epub 2016 Jan 21.
The R2R3-MYB proteins comprise one of the largest families of transcription factors in plants. Although genome-wide analysis of this family has been carried out in some plant species, little is known about R2R3-MYB genes in canola (Brassica napus L.). In this study, we have identified 76 R2R3-MYB genes in the canola genome through mining of expressed sequence tags (ESTs). The cDNA sequences of 44 MYB genes were successfully cloned. The transcriptional activities of BnaMYB proteins encoded by these genes were assayed in yeast. The subcellular localizations of representative R2R3-MYB proteins were investigated through GFP fusion. Besides, the transcript abundance level analysis during abiotic conditions and ABA treatment identified a group of R2R3-MYB genes that responded to one or more treatments. Furthermore, we identified a previously functionally unknown MYB gene-BnaMYB78, which modulates reactive oxygen species (ROS)-dependent cell death in Nicotiana benthamiana, through regulating the transcription of a few ROS- and defence-related genes. Taken together, this study has provided a solid foundation for understanding the roles and regulatory mechanism of canola R2R3-MYB genes.
R2R3-MYB蛋白是植物中最大的转录因子家族之一。尽管已经在一些植物物种中对该家族进行了全基因组分析,但对于油菜(甘蓝型油菜)中的R2R3-MYB基因却知之甚少。在本研究中,我们通过挖掘表达序列标签(EST)在油菜基因组中鉴定出了76个R2R3-MYB基因。成功克隆了44个MYB基因的cDNA序列。对这些基因编码的BnaMYB蛋白在酵母中进行了转录活性检测。通过绿色荧光蛋白(GFP)融合对代表性R2R3-MYB蛋白的亚细胞定位进行了研究。此外,对非生物条件和脱落酸(ABA)处理期间的转录丰度水平分析确定了一组对一种或多种处理有响应的R2R3-MYB基因。此外,我们鉴定出了一个以前功能未知的MYB基因——BnaMYB78,它通过调控一些与活性氧(ROS)和防御相关基因的转录来调节本氏烟草中依赖ROS的细胞死亡。综上所述,本研究为理解油菜R2R3-MYB基因的作用和调控机制提供了坚实的基础。