Ortega-Morales Benjamín O, Narváez-Zapata José, Reyes-Estebanez Manuela, Quintana Patricia, De la Rosa-García Susana Del C, Bullen Heather, Gómez-Cornelio Sergio, Chan-Bacab Manuel J
Departamento de Microbiología Ambiental y Biotecnología, Universidad Autónoma de Campeche Campeche, Mexico.
Centro de Biotecnología Genómica, Instituto Politécnico Nacional Reynosa, Mexico.
Front Microbiol. 2016 Feb 23;7:201. doi: 10.3389/fmicb.2016.00201. eCollection 2016.
Soil and rock surfaces support microbial communities involved in mineral weathering processes. Using selective isolation, fungi were obtained from limestone surfaces of Mayan monuments in the semi-arid climate at Yucatan, Mexico. A total of 101 isolates representing 53 different taxa were studied. Common fungi such as Fusarium, Pestalotiopsis, Trichoderma, and Penicillium were associated with surfaces and were, probably derived from airborne spores. In contrast, unusual fungi such as Rosellinia, Annulohypoxylon, and Xylaria were predominantly identified from mycelium particles of biofilm biomass. Simulating oligotrophic conditions, agar amended with CaCO3 was inoculated with fungi to test for carbonate activity. A substantial proportion of fungi, in particular those isolated from mycelium (59%), were capable of solubilizing calcium by means of organic acid release, notably oxalic acid as evidenced by ion chromatography. Contrary to our hypothesis, nutrient level was not a variable influencing the CaCO3 solubilization ability among isolates. Particularly active fungi (Annulohypoxylon stygium, Penicillium oxalicum, and Rosellinia sp.) were selected as models for bioweathering experiments with limestone-containing mesocosms to identify if other mineral phases, in addition to oxalates, were linked to bioweathering processes. Fungal biofilms were seen heavily covering the stone surface, while a biomineralized front was also observed at the stone-biofilm interface, where network of hyphae and mycogenic crystals was observed. X-ray diffraction analysis (XRD) identified calcite as the main phase, along with whewellite and wedellite. In addition, lower levels of citrate were detected by Attenuated Total Reflectance-Fourier-Transform Infrared Spectroscopy (ATR-FTIR). Overall, our results suggest that a diverse fungal community is associated with limestone surfaces insemi-arid climates. A subset of this community is geochemically active, excreting organic acids under quasi-oligotrophic conditions, suggesting that the high metabolic cost of exuding organic acids beneficial under nutrient limitation. Oxalic acid release may deteriorate or stabilize limestone surfaces, depending on microclimatic dynamics.
土壤和岩石表面存在参与矿物风化过程的微生物群落。通过选择性分离,从墨西哥尤卡坦半岛半干旱气候下玛雅古迹的石灰岩表面获取了真菌。共研究了代表53个不同分类群的101个分离株。常见真菌如镰刀菌、拟盘多毛孢、木霉和青霉与表面相关,可能源自空气传播的孢子。相比之下,不寻常的真菌如座坚壳属、环痕炭团菌属和炭角菌属主要从生物膜生物量的菌丝体颗粒中鉴定出来。模拟贫营养条件,用碳酸钙改良的琼脂接种真菌以测试碳酸盐活性。相当一部分真菌,特别是那些从菌丝体分离出的真菌(59%),能够通过释放有机酸,尤其是离子色谱法证明的草酸来溶解钙。与我们的假设相反,营养水平不是影响分离株中碳酸钙溶解能力的变量。选择特别活跃的真菌(暗黑环痕炭团菌、草酸青霉和座坚壳属真菌)作为含石灰石中宇宙生物风化实验的模型,以确定除草酸盐外,是否还有其他矿物相与生物风化过程有关。观察到真菌生物膜大量覆盖在石头表面,同时在石头 - 生物膜界面也观察到一个生物矿化前沿,在那里观察到了菌丝网络和真菌成因晶体。X射线衍射分析(XRD)确定方解石为主要相,还有水草酸钙石和水钙草酸石。此外,衰减全反射傅里叶变换红外光谱(ATR - FTIR)检测到较低水平的柠檬酸盐。总体而言,我们的结果表明,在半干旱气候下,多种真菌群落与石灰岩表面相关。该群落的一个子集具有地球化学活性,在准贫营养条件下分泌有机酸,这表明在营养限制下分泌有机酸的高代谢成本是有益的。草酸的释放可能会使石灰岩表面恶化或稳定,这取决于微气候动态。