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玫瑰色艾利福丁菌属,新属,和Sediminis 艾利福丁菌,两种从中盐矿样本中分离得到的中等嗜盐细菌。

Aliifodinibius roseus gen. nov., sp. nov., and Aliifodinibius sediminis sp. nov., two moderately halophilic bacteria isolated from salt mine samples.

机构信息

The Key Laboratory for Microbial Resources of the Ministry of Education, and Laboratory for Conservation and Utilization of Bio-Resources, Yunnan Institute of Microbiology, Yunnan University, Kunming, Yunnan 650091, PR China.

The Technology Research Center, HongyunHonghe Tobacco (Group), Co., Ltd, Kunming, Yunnan 650202, PR China.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2907-2913. doi: 10.1099/ijs.0.043869-0. Epub 2013 Jan 18.

DOI:10.1099/ijs.0.043869-0
PMID:23334882
Abstract

Two rod-shaped, non-motile bacteria were isolated from two separate salt mines in Yunnan, south-western China. These strains, designated YIM D15(T) and YIM J21(T), were Gram-negative and moderately halophilic. The two strains required 6-10 % NaCl (w/v; optimal) for growth. The DNA G+C contents of strains YIM D15(T) and YIM J21(T) were 49.0 mol% and 48.4 mol%, respectively. The predominant isoprenoid quinone was MK-7. The polar lipid profiles of strains YIM D15(T) and YIM J21(T) were composed predominantly of diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, three unknown polar lipids and one glycolipid. Minor amounts of other lipids were also detectable. The predominant cellular fatty acids were iso-C15 : 0, anteiso-C15 : 0, iso-C17 : 1ω9c/10 methyl-C16 : 0 and C16 : 1ω7c/C16 : 1ω6c. Phylogenetic analysis based on 16S rRNA gene sequence comparisons showed that the two isolates formed a distinct clade with the genus Fodinibius (in the phylum Bacteroidetes) and were related to the species Fodinibius salinus, with sequence similarities of 91.9-92.4 %. Analyses of 16S rRNA gene sequences revealed that strains YIM D15(T) and YIM J21(T) were related to each other (97.3 % sequence similarity). The DNA-DNA hybridization relatedness between the two isolates was 34 %. On the basis of the phylogenetic analysis, DNA-DNA hybridization relatedness, phenotypic and chemotaxonomic characteristics, strains YIM D15(T) and YIM J21(T) should be classified as members of a novel genus and as two novel species, for which the names Aliifodinibius roseus gen. nov., sp. nov. (type strain YIM D15(T) = ACCC 10715(T) = KCTC 23442(T)) and Aliifodinibius sediminis sp. nov. (type strain YIM J21(T) = ACCC 10714(T) = DSM 21194(T)) are proposed.

摘要

从中国西南部云南省的两个不同盐矿中分离到两株杆状、非运动的细菌。这些菌株被命名为 YIM D15(T) 和 YIM J21(T),革兰氏阴性,中度嗜盐。这两种菌株的最佳生长盐浓度为 6-10%(w/v)。菌株 YIM D15(T) 和 YIM J21(T) 的 DNA G+C 含量分别为 49.0 mol%和 48.4 mol%。主要的类异戊二烯醌为 MK-7。菌株 YIM D15(T) 和 YIM J21(T) 的极性脂谱主要由双磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、三种未知极性脂和一种糖脂组成。还可以检测到少量其他脂质。主要的细胞脂肪酸为 iso-C15 : 0、anteiso-C15 : 0、iso-C17 : 1ω9c/10 methyl-C16 : 0 和 C16 : 1ω7c/C16 : 1ω6c。基于 16S rRNA 基因序列比较的系统发育分析表明,这两个分离株与 Fodinibius 属(在拟杆菌门)形成一个独特的分支,与 Fodinibius salinus 种最为相关,序列相似性为 91.9-92.4%。16S rRNA 基因序列分析表明,菌株 YIM D15(T) 和 YIM J21(T) 彼此相关(序列相似性为 97.3%)。这两个分离株之间的 DNA-DNA 杂交相关性为 34%。基于系统发育分析、DNA-DNA 杂交相关性、表型和化学分类特征,菌株 YIM D15(T) 和 YIM J21(T) 应归类为一个新属的成员和两个新种,分别命名为 Aliifodinibius roseus 属。nov.(模式菌株 YIM D15(T) = ACCC 10715(T) = KCTC 23442(T))和 Aliifodinibius sediminis sp. nov.(模式菌株 YIM J21(T) = ACCC 10714(T) = DSM 21194(T))。

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