Salsi Enea, Farah Elie, Ermolenko Dmitri N
Department of Biochemistry and Biophysics & Center for RNA Biology, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642, USA.
Department of Biochemistry and Biophysics & Center for RNA Biology, School of Medicine and Dentistry, University of Rochester, Rochester, NY 14642, USA.
J Mol Biol. 2016 May 22;428(10 Pt B):2248-58. doi: 10.1016/j.jmb.2016.03.032. Epub 2016 Apr 8.
Elongation factor G (EF-G) is a universally conserved translational GTPase that promotes the translocation of tRNA and mRNA through the ribosome. EF-G binds to the ribosome in a GTP-bound form and subsequently catalyzes GTP hydrolysis. The contribution of the ribosome-stimulated GTP hydrolysis by EF-G to tRNA/mRNA translocation remains debated. Here, we show that while EF-G•GDP does not stably bind to the ribosome and induce translocation, EF-G•GDP in complex with phosphate group analogs BeF3(-) and AlF4(-) promotes the translocation of tRNA and mRNA. Furthermore, the rates of mRNA translocation induced by EF-G in the presence of GTP and a non-hydrolyzable analog of GTP, GDP•BeF3(-) are similar. Our results are consistent with the model suggesting that GTP hydrolysis is not directly coupled to mRNA/tRNA translocation. Hence, GTP binding is required to induce the activated, translocation-competent conformation of EF-G while GTP hydrolysis triggers EF-G release from the ribosome.
延伸因子G(EF-G)是一种普遍保守的翻译GTP酶,它促进tRNA和mRNA通过核糖体进行易位。EF-G以结合GTP的形式与核糖体结合,随后催化GTP水解。EF-G介导的核糖体刺激的GTP水解对tRNA/mRNA易位的贡献仍存在争议。在这里,我们表明,虽然EF-G•GDP不会稳定地结合到核糖体上并诱导易位,但与磷酸基团类似物BeF3(-)和AlF4(-)形成复合物的EF-G•GDP会促进tRNA和mRNA的易位。此外,在GTP和GTP的不可水解类似物GDP•BeF3(-)存在的情况下,EF-G诱导的mRNA易位速率相似。我们的结果与该模型一致,该模型表明GTP水解并不直接与mRNA/tRNA易位偶联。因此,需要结合GTP来诱导EF-G的活化、具有易位能力的构象,而GTP水解触发EF-G从核糖体上释放。