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库库尔坎火球菌新种,一种从深海热液喷口分离出的嗜热、嗜压古菌。

Pyrococcus kukulkanii sp. nov., a hyperthermophilic, piezophilic archaeon isolated from a deep-sea hydrothermal vent.

作者信息

Callac Nolwenn, Oger Philippe, Lesongeur Françoise, Rattray Jayne E, Vannier Pauline, Michoud Grégoire, Beauverger Mickael, Gayet Nicolas, Rouxel Olivier, Jebbar Mohamed, Godfroy Anne

机构信息

Department of Geological Sciences, Stockholm University, Stockholm, Sweden.

CNRS, Laboratoire de Microbiologie des Environnements Extrêmes, UMR 6197, 4, rue Dumont d'Urville, 29280 Plouzané, France.

出版信息

Int J Syst Evol Microbiol. 2016 Aug;66(8):3142-3149. doi: 10.1099/ijsem.0.001160. Epub 2016 May 17.

Abstract

A novel hyperthermophilic, piezophilic, anaerobic archaeon, designated NCB100T, was isolated from a hydrothermal vent flange fragment collected in the Guaymas basin at the hydrothermal vent site named 'Rebecca's Roost' at a depth of 1997 m. Enrichment and isolation were performed at 100 °C under atmospheric pressure. Cells of strain NCB100T were highly motile, irregular cocci with a diameter of ~1 µm. Growth was recorded at temperatures between 70 and 112 °C (optimum 105 °C) and hydrostatic pressures of 0.1-80 MPa (optimum 40-50 MPa). Growth was observed at pH 3.5-8.5 (optimum pH 7) and with 1.5-7 % NaCl (optimum at 2.5-3 %). Strain NCB100T was a strictly anaerobic chemo-organoheterotroph and grew on complex proteinaceous substrates such as yeast extract, peptone and tryptone, as well as on glycogen and starch. Elemental sulfur was required for growth and was reduced to hydrogen sulfide. The fermentation products from complex proteinaceous substrates were CO2 and H2. The G+C content of the genomic DNA was 41.3 %. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain NCB100T belongs to the genus Pyrococcus, showing 99 % similarity with the other described species of the genus Pyrococcus. On the basis of physiological characteristics, DNA G+C content, similarity level between ribosomal proteins and an average nucleotide identity value of 79 %, strain NCB100T represents a novel species for which the name Pyrococcus kukulkanii sp. nov. is proposed. The type strain is NCB100T (=DSM 101590T=Souchothèque de Bretagne BG1337T).

摘要

从瓜伊马斯盆地“丽贝卡栖息地”热液喷口处采集的、深度为1997米的热液喷口法兰碎片中,分离出了一种新型嗜热、嗜压、厌氧古菌,命名为NCB100T。在常压下于100℃进行富集和分离。NCB100T菌株的细胞高度游动,为直径约1 µm的不规则球菌。在70至112℃(最适温度105℃)以及0.1 - 80 MPa(最适压力40 - 50 MPa)的静水压力下记录到生长。在pH 3.5 - 8.5(最适pH 7)以及1.5 - 7% NaCl(最适浓度2.5 - 3%)条件下观察到生长。NCB100T菌株是严格厌氧的化能有机异养菌,能在复杂的蛋白质底物(如酵母提取物、蛋白胨和胰蛋白胨)以及糖原和淀粉上生长。生长需要元素硫,并将其还原为硫化氢。复杂蛋白质底物的发酵产物为二氧化碳和氢气。基因组DNA的G + C含量为41.3%。对16S rRNA基因序列进行系统发育分析表明,NCB10,T菌株属于嗜热栖热菌属,与嗜热栖热菌属其他已描述物种的相似性为99%。基于生理特征、DNA G + C含量、核糖体蛋白之间的相似性水平以及79%的平均核苷酸同一性值,NCB100T菌株代表了一个新物种,为此提出了嗜热栖热菌库库尔坎新种(Pyrococcus kukulkanii sp. nov.)的名称。模式菌株为NCB100T(=DSM 101590T=布列塔尼菌种保藏中心BG1337T)。

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