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通过比较多组学方法揭示海洋无脊椎动物对急性变暖的生物多样性响应。

Biodiversity in marine invertebrate responses to acute warming revealed by a comparative multi-omics approach.

作者信息

Clark Melody S, Sommer Ulf, Sihra Jaspreet K, Thorne Michael A S, Morley Simon A, King Michelle, Viant Mark R, Peck Lloyd S

机构信息

British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK.

NERC Biomolecular Analysis Facility - Metabolomics Node (NBAF-B), School of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.

出版信息

Glob Chang Biol. 2017 Jan;23(1):318-330. doi: 10.1111/gcb.13357. Epub 2016 Jun 17.

Abstract

Understanding species' responses to environmental change underpins our abilities to make predictions on future biodiversity under any range of scenarios. In spite of the huge biodiversity in most ecosystems, a model species approach is often taken in environmental studies. To date, we still do not know how many species we need to study to input into models and inform on ecosystem-level responses to change. In this study, we tested current paradigms on factors setting thermal limits by investigating the acute warming response of six Antarctic marine invertebrates: a crustacean Paraceradocus miersi, a brachiopod Liothyrella uva, two bivalve molluscs, Laternula elliptica, Aequiyoldia eightsii, a gastropod mollusc Marseniopsis mollis and an echinoderm Cucumaria georgiana. Each species was warmed at the rate of 1 °C h and taken to the same physiological end point (just prior to heat coma). Their molecular responses were evaluated using complementary metabolomics and transcriptomics approaches with the aim of discovering the underlying mechanisms of their resilience or sensitivity to warming. The responses were species-specific; only two showed accumulation of anaerobic end products and three exhibited the classical heat shock response with expression of HSP70 transcripts. These diverse cellular measures did not directly correlate with resilience to heat stress and suggested that each species may have a different critical point of failure. Thus, one unifying molecular mechanism underpinning response to warming could not be assigned, and no overarching paradigm was supported. This biodiversity in response makes future ecosystems predictions extremely challenging, as we clearly need to develop a macrophysiology-type approach to cellular evaluations of the environmental stress response, studying a range of well-rationalized members from different community levels and of different phylogenetic origins rather than extrapolating from one or two arbitrary model species.

摘要

了解物种对环境变化的反应是我们在任何情景下预测未来生物多样性能力的基础。尽管大多数生态系统中存在着巨大的生物多样性,但环境研究中通常采用模式物种方法。迄今为止,我们仍然不知道需要研究多少物种才能输入模型并了解生态系统对变化的反应。在本研究中,我们通过研究六种南极海洋无脊椎动物的急性升温反应,测试了当前关于设定热极限因素的范式:一种甲壳类动物米氏副哲水蚤(Paraceradocus miersi)、一种腕足动物尤氏薄壳贝(Liothyrella uva)、两种双壳贝类椭圆海笋(Laternula elliptica)、艾氏海扇蛤(Aequiyoldia eightsii)、一种腹足类软体动物莫氏玛氏螺(Marseniopsis mollis)和一种棘皮动物乔治亚海参(Cucumaria georgiana)。每个物种以每小时1摄氏度的速率升温,并达到相同的生理终点(即将进入热昏迷之前)。我们使用互补的代谢组学和转录组学方法评估它们的分子反应,目的是发现它们对升温的恢复力或敏感性的潜在机制。这些反应是物种特异性的;只有两种显示出厌氧终产物的积累,三种表现出经典的热休克反应,伴有热休克蛋白70(HSP70)转录本的表达。这些不同的细胞指标与对热应激的恢复力没有直接关联,这表明每个物种可能有不同的失效临界点。因此,无法确定一种统一的分子机制来解释对升温的反应,也没有支持总体范式。这种反应的生物多样性使得未来生态系统的预测极具挑战性,因为我们显然需要开发一种宏观生理学类型的方法来对环境应激反应进行细胞评估,研究来自不同群落水平和不同系统发育起源的一系列经过充分合理选择的成员,而不是从一两个任意的模式物种进行推断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad79/6849730/798610b7d2be/GCB-23-318-g001.jpg

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