Bar-Even Arren
Max Planck Institute of Molecular Plant Physiology , Am Mühlenberg 1, 14476 Potsdam-Golm, Germany.
Biochemistry. 2016 Jul 19;55(28):3851-63. doi: 10.1021/acs.biochem.6b00495. Epub 2016 Jul 5.
Formate may become an ideal mediator between the physicochemical and biological realms, as it can be produced efficiently from multiple available sources, such as electricity and biomass, and serve as one of the simplest organic compounds for providing both carbon and energy to living cells. However, limiting the realization of formate as a microbial feedstock is the low diversity of formate-fixing enzymes and thereby the small number of naturally occurring formate-assimilation pathways. Here, the natural enzymes and pathways supporting formate assimilation are presented and discussed together with proposed synthetic routes that could permit growth on formate via existing as well as novel formate-fixing reactions. By considering such synthetic routes, the diversity of metabolic solutions for formate assimilation can be expanded dramatically, such that different host organisms, cultivation conditions, and desired products could be matched with the most suitable pathway. Astute application of old and new formate-assimilation pathways may thus become a cornerstone in the development of sustainable strategies for microbial production of value-added chemicals.
甲酸盐可能成为物理化学领域和生物领域之间的理想介质,因为它可以从多种可用来源(如电力和生物质)高效生产,并且作为最简单的有机化合物之一,能为活细胞提供碳和能量。然而,限制甲酸盐作为微生物原料实现应用的因素是固定甲酸盐的酶多样性低,从而导致天然存在的甲酸盐同化途径数量较少。在此,介绍并讨论了支持甲酸盐同化的天然酶和途径,以及通过现有的和新的甲酸盐固定反应实现以甲酸盐为原料生长的拟议合成路线。通过考虑这些合成路线,可以显著扩大甲酸盐同化的代谢解决方案的多样性,从而使不同的宿主生物、培养条件和所需产品能够与最合适的途径相匹配。因此,明智地应用新旧甲酸盐同化途径可能成为开发微生物生产增值化学品可持续策略的基石。