• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过CRISPR/Cas9介导的基因组编辑研究人类白细胞介素-8基因单倍型的功能作用。

Investigation of the functional role of human Interleukin-8 gene haplotypes by CRISPR/Cas9 mediated genome editing.

作者信息

Benakanakere Manjunatha R, Finoti Livia S, Tanaka Urara, Grant Gregory R, Scarel-Caminaga Raquel M, Kinane Denis F

机构信息

Department of Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, PA, USA.

Department of Oral Diagnosis and Surgery, School of Dentistry at Araraquara, UNESP- Univ Estadual Paulista, SP, Brazil.

出版信息

Sci Rep. 2016 Aug 8;6:31180. doi: 10.1038/srep31180.

DOI:10.1038/srep31180
PMID:27499075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4976357/
Abstract

Interleukin-8 (IL-8) gene polymorphisms have been considered as susceptibility factors in periodontal disease. However, the functional roles of IL-8 gene haplotypes have not been investigated. Here, we demonstrate for the first time the use of the CRISPR/Cas9 system to engineer the IL-8 gene, and tested the functionality of different haplotypes. Two sgRNAs vectors targeting the IL-8 gene and the naked homologous repair DNA carrying different haplotypes were used to successfully generate HEK293T cells carrying the AT genotype at the first SNP - rs4073 (alias -251), TT genotype at the second SNP - rs2227307 (alias +396), TC or CC genotypes at the third SNP - rs2227306 (alias +781) at the IL-8 locus. When stimulated with Poly I:C, ATC/TTC haplotype, cells significantly up-regulated the IL-8 at both transcriptional and translational levels. To test whether ATC/TTC haplotype is functional, we used a trans-well assay to measure the transmigration of primary neutrophils incubated with supernatants from the Poly I:C stimulation experiment. ATC/TTC haplotype cells significantly increased transmigration of neutrophils confirming the functional role for this IL-8 haplotype. Taken together, our data provides evidence that carriage of the ATC/TTC haplotype in itself may increase the influx of neutrophils in inflammatory lesions and influence disease susceptibility.

摘要

白细胞介素-8(IL-8)基因多态性被认为是牙周病的易感因素。然而,IL-8基因单倍型的功能作用尚未得到研究。在此,我们首次展示了使用CRISPR/Cas9系统对IL-8基因进行工程改造,并测试了不同单倍型的功能。使用两个靶向IL-8基因的sgRNAs载体和携带不同单倍型的无载体同源修复DNA,成功地在IL-8基因座的第一个单核苷酸多态性(SNP)-rs4073(别名-251)处产生了携带AT基因型的HEK293T细胞,在第二个SNP-rs2227307(别名+396)处产生了携带TT基因型的细胞,在第三个SNP-rs2227306(别名+781)处产生了携带TC或CC基因型的细胞。用聚肌胞苷酸(Poly I:C)刺激时,ATC/TTC单倍型细胞在转录和翻译水平上均显著上调IL-8。为了测试ATC/TTC单倍型是否具有功能,我们使用了跨膜迁移实验来测量与Poly I:C刺激实验的上清液孵育的原代中性粒细胞的迁移。ATC/TTC单倍型细胞显著增加了中性粒细胞的迁移,证实了该IL-8单倍型的功能作用。综上所述,我们的数据提供了证据,表明携带ATC/TTC单倍型本身可能会增加炎症病变中中性粒细胞的流入,并影响疾病易感性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/05f8574cbf3e/srep31180-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/c1fb623ba99f/srep31180-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/6296d1d88b15/srep31180-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/964dbfb3d321/srep31180-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/16e92e4efecc/srep31180-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/6e625672da19/srep31180-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/05f8574cbf3e/srep31180-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/c1fb623ba99f/srep31180-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/6296d1d88b15/srep31180-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/964dbfb3d321/srep31180-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/16e92e4efecc/srep31180-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/6e625672da19/srep31180-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33c9/4976357/05f8574cbf3e/srep31180-f6.jpg

相似文献

1
Investigation of the functional role of human Interleukin-8 gene haplotypes by CRISPR/Cas9 mediated genome editing.通过CRISPR/Cas9介导的基因组编辑研究人类白细胞介素-8基因单倍型的功能作用。
Sci Rep. 2016 Aug 8;6:31180. doi: 10.1038/srep31180.
2
The ATC/TTC haplotype in the Interleukin 8 gene in response to Gram-negative bacteria: A pilot study.白细胞介素 8 基因中 ATC/TTC 单倍型对革兰氏阴性菌的反应:一项初步研究。
Arch Oral Biol. 2019 Nov;107:104508. doi: 10.1016/j.archoralbio.2019.104508. Epub 2019 Jul 24.
3
Haplotypes of susceptibility to chronic periodontitis in the Interleukin 8 gene do not influence protein level in the gingival crevicular fluid.白细胞介素 8 基因中慢性牙周炎易感性的单体型不影响龈沟液中的蛋白质水平。
Arch Oral Biol. 2012 Oct;57(10):1355-61. doi: 10.1016/j.archoralbio.2012.07.003. Epub 2012 Aug 9.
4
Haplotypes in the interleukin 8 gene and their association with chronic periodontitis susceptibility.白细胞介素 8 基因的单倍型及其与慢性牙周炎易感性的关系。
Biochem Genet. 2011 Jun;49(5-6):292-302. doi: 10.1007/s10528-010-9407-3. Epub 2010 Dec 25.
5
Clinical outcomes of periodontal therapy are not influenced by the ATC/TTC haplotype in the IL8 gene.白细胞介素8基因中ATC/TTC单倍型不影响牙周治疗的临床疗效。
J Periodontal Res. 2014 Aug;49(4):489-98. doi: 10.1111/jre.12128. Epub 2013 Aug 29.
6
Efficient SSA-mediated precise genome editing using CRISPR/Cas9.利用 CRISPR/Cas9 通过高效的 SSA 介导精确基因组编辑。
FEBS J. 2018 Sep;285(18):3362-3375. doi: 10.1111/febs.14626. Epub 2018 Aug 25.
7
Functional haplotype in the Interleukin8 (CXCL8) gene is associated with type 2 Diabetes Mellitus and Periodontitis in Brazilian population.白细胞介素 8 (CXCL8) 基因中的功能性单倍型与巴西人群的 2 型糖尿病和牙周炎有关。
Diabetes Metab Syndr. 2020 Nov-Dec;14(6):1665-1672. doi: 10.1016/j.dsx.2020.08.036. Epub 2020 Aug 31.
8
Single nucleotide polymorphism and haplotype association of the interleukin-8 gene with nasopharyngeal carcinoma.白细胞介素-8基因单核苷酸多态性及单倍型与鼻咽癌的关联
Clin Immunol. 2007 Dec;125(3):309-17. doi: 10.1016/j.clim.2007.07.010. Epub 2007 Aug 27.
9
Genome Engineering for Stem Cell Transplantation.用于干细胞移植的基因组工程
Exp Clin Transplant. 2019 Jan;17(Suppl 1):31-37. doi: 10.6002/ect.MESOT2018.L34.
10
CRISPR/Cas9-mediated genome editing of splicing mutation causing congenital hearing loss.CRISPR/Cas9 介导的剪接突变导致先天性耳聋的基因组编辑。
Gene. 2019 Jun 30;703:83-90. doi: 10.1016/j.gene.2019.03.020. Epub 2019 Mar 18.

引用本文的文献

1
The Diagnostic and Prognostic Role of Interleukin 6 and Interleukin 8 in Childhood Acute Gastroenteritis-A Review of the Literature.白细胞介素 6 和白细胞介素 8 在儿童急性肠炎中的诊断和预后作用——文献综述。
Int J Mol Sci. 2024 Jul 12;25(14):7655. doi: 10.3390/ijms25147655.
2
IL-8 (CXCL8) Correlations with Psychoneuroimmunological Processes and Neuropsychiatric Conditions.白细胞介素-8(CXCL8)与精神神经免疫过程及神经精神疾病的相关性。
J Pers Med. 2024 May 3;14(5):488. doi: 10.3390/jpm14050488.
3
Single nucleotide polymorphisms rs148582811 regulates its host gene expression to affect nicotine-associated hippocampus-dependent memory.

本文引用的文献

1
Photoactivatable CRISPR-Cas9 for optogenetic genome editing.光激活 CRISPR-Cas9 用于光遗传学基因组编辑。
Nat Biotechnol. 2015 Jul;33(7):755-60. doi: 10.1038/nbt.3245. Epub 2015 Jun 15.
2
Transcriptional and posttranscriptional regulation of CXCL8/IL-8 gene expression induced by connective tissue growth factor.结缔组织生长因子诱导的CXCL8/IL-8基因表达的转录和转录后调控
Immunol Res. 2016 Apr;64(2):369-84. doi: 10.1007/s12026-015-8670-0.
3
Association between Interleukin-1β Gene -511C>T/+3954C>T Polymorphisms and Aggressive Periodontitis Susceptibility: Evidence from a Meta-Analysis.
单核苷酸多态性rs148582811调节其宿主基因表达,以影响与尼古丁相关的海马体依赖性记忆。
iScience. 2023 Oct 28;26(12):108335. doi: 10.1016/j.isci.2023.108335. eCollection 2023 Dec 15.
4
The Phenolic Profile and Anti-Inflammatory Effect of Ethanolic Extract of Polish Propolis on Activated Human Gingival Fibroblasts-1 Cell Line.波兰蜂胶醇提物的酚类成分分析及其对人牙龈成纤维细胞-1 系的抗炎作用。
Molecules. 2023 Nov 8;28(22):7477. doi: 10.3390/molecules28227477.
5
The Anti-Inflammatory Effects of Extracts on LPS-Induced Cytokines Release in Human Macrophages.姜黄提取物对脂多糖诱导的人巨噬细胞细胞因子释放的抗炎作用。
Molecules. 2023 Jun 25;28(13):4991. doi: 10.3390/molecules28134991.
6
Interleukin 6 and interferon gamma haplotypes are related to cytokine serum levels in dogs in an endemic Leishmania infantum region.白细胞介素 6 和干扰素 γ 单倍型与地方性利什曼原虫感染地区犬的细胞因子血清水平相关。
Infect Dis Poverty. 2023 Feb 10;12(1):9. doi: 10.1186/s40249-023-01058-3.
7
Effects of a whole food diet on immune function and inflammatory phenotype in healthy dogs: A randomized, open-labeled, cross-over clinical trial.全食物饮食对健康犬免疫功能和炎症表型的影响:一项随机、开放标签、交叉临床试验。
Front Vet Sci. 2022 Aug 23;9:898056. doi: 10.3389/fvets.2022.898056. eCollection 2022.
8
Biological Role, Mechanism of Action and the Importance of Interleukins in Kidney Diseases.白细胞介素在肾脏疾病中的生物学作用、作用机制及重要性
Int J Mol Sci. 2022 Jan 7;23(2):647. doi: 10.3390/ijms23020647.
9
Clinically Healthy Human Gingival Tissues Show Significant Inter-individual Variability in GCF Chemokine Expression and Subgingival Plaque Microbial Composition.临床健康的人类牙龈组织在龈沟液趋化因子表达和龈下菌斑微生物组成方面存在显著的个体间差异。
Front Oral Health. 2021 Jul 14;2:689475. doi: 10.3389/froh.2021.689475. eCollection 2021.
10
Periodontitis association with IL-8 gene polymorphisms.牙周炎与 IL-8 基因多态性的关联。
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2022 Mar;166(1):28-39. doi: 10.5507/bp.2021.066. Epub 2021 Dec 13.
白细胞介素-1β基因-511C>T/+3954C>T多态性与侵袭性牙周炎易感性的关联:一项荟萃分析的证据
Med Sci Monit. 2015 Jun 3;21:1617-24. doi: 10.12659/MSM.894402.
4
Expanding the Biologist's Toolkit with CRISPR-Cas9.利用 CRISPR-Cas9 扩展生物学家的工具包。
Mol Cell. 2015 May 21;58(4):568-74. doi: 10.1016/j.molcel.2015.02.032.
5
Experimental gingivitis, bacteremia and systemic biomarkers: a randomized clinical trial.实验性牙龈炎、菌血症与全身生物标志物:一项随机临床试验。
J Periodontal Res. 2015 Dec;50(6):864-9. doi: 10.1111/jre.12280. Epub 2015 May 9.
6
Biotechnology. A prudent path forward for genomic engineering and germline gene modification.生物技术。基因组工程和生殖系基因修饰的审慎前行之路。
Science. 2015 Apr 3;348(6230):36-8. doi: 10.1126/science.aab1028. Epub 2015 Mar 19.
7
Genetic screens and functional genomics using CRISPR/Cas9 technology.利用 CRISPR/Cas9 技术进行遗传筛选和功能基因组学研究。
FEBS J. 2015 Apr;282(8):1383-93. doi: 10.1111/febs.13248. Epub 2015 Mar 16.
8
Digenome-seq: genome-wide profiling of CRISPR-Cas9 off-target effects in human cells.Digenome-seq:在人类细胞中对 CRISPR-Cas9 脱靶效应进行全基因组分析。
Nat Methods. 2015 Mar;12(3):237-43, 1 p following 243. doi: 10.1038/nmeth.3284. Epub 2015 Feb 9.
9
Neutrophil homeostasis and inflammation: novel paradigms from studying periodontitis.中性粒细胞稳态与炎症:牙周炎研究的新范例
J Leukoc Biol. 2015 Oct;98(4):539-48. doi: 10.1189/jlb.3VMR1014-468R. Epub 2014 Dec 29.
10
Generation of WNK1 knockout cell lines by CRISPR/Cas-mediated genome editing.通过CRISPR/Cas介导的基因组编辑生成WNK1基因敲除细胞系。
Am J Physiol Renal Physiol. 2015 Feb 15;308(4):F366-76. doi: 10.1152/ajprenal.00612.2014. Epub 2014 Dec 4.