Van Eyk Jennifer E, Corrales Fernando J, Aebersold Ruedi, Cerciello Ferdinando, Deutsch Eric W, Roncada Paola, Sanchez Jean-Charles, Yamamoto Tadashi, Yang Pengyuan, Zhang Hui, Omenn Gilbert S
Advanced Clinical BioSystems Research Institute, Department of Medicine, Cedars-Sinai Medical Centre , Los Angeles, California 90038, United States.
Department of Hepatology, Proteomics Laboratory, CIMA, University of Navarra; Ciberhed; PRB2, ProteoRed-ISCIII, 31008 Pamplona, Spain.
J Proteome Res. 2016 Nov 4;15(11):3979-3987. doi: 10.1021/acs.jproteome.6b00444. Epub 2016 Sep 20.
The Biology and Disease-driven Human Proteome Project (B/D-HPP) is aimed at supporting and enhancing the broad use of state-of-the-art proteomic methods to characterize and quantify proteins for in-depth understanding of the molecular mechanisms of biological processes and human disease. Based on a foundation of the pre-existing HUPO initiatives begun in 2002, the B/D-HPP is designed to provide standardized methods and resources for mass spectrometry and specific protein affinity reagents and facilitate accessibility of these resources to the broader life sciences research and clinical communities. Currently there are 22 B/D-HPP initiatives and 3 closely related HPP resource pillars. The B/D-HPP groups are working to define sets of protein targets that are highly relevant to each particular field to deliver relevant assays for the measurement of these selected targets and to disseminate and make publicly accessible the information and tools generated. Major developments are the 2016 publications of the Human SRM Atlas and of "popular protein sets" for six organ systems. Here we present the current activities and plans of the BD-HPP initiatives as highlighted in numerous B/D-HPP workshops at the 14th annual HUPO 2015 World Congress of Proteomics in Vancouver, Canada.
生物学与疾病驱动的人类蛋白质组计划(B/D-HPP)旨在支持并促进广泛使用最先进的蛋白质组学方法来表征和定量蛋白质,以便深入了解生物过程和人类疾病的分子机制。基于2002年启动的现有人类蛋白质组组织(HUPO)计划,B/D-HPP旨在为质谱分析和特定蛋白质亲和试剂提供标准化方法和资源,并促进这些资源被更广泛的生命科学研究和临床群体所使用。目前有22个B/D-HPP计划以及3个密切相关的HPP资源支柱。B/D-HPP各小组正在努力确定与每个特定领域高度相关的蛋白质靶标集,以提供用于测量这些选定靶标的相关检测方法,并传播和公开所产生的信息及工具。主要进展包括2016年发布的人类SRM图谱以及六个器官系统的“常见蛋白质集”。在此,我们介绍在加拿大温哥华举行的第14届年度HUPO 2015世界蛋白质组学大会上众多B/D-HPP研讨会所强调的BD-HPP计划的当前活动和计划。