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本文引用的文献

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SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.SSPACE-LongRead：利用长读段序列信息搭建细菌草图基因组支架
BMC Bioinformatics. 2014 Jun 20;15:211. doi: 10.1186/1471-2105-15-211.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
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KAAS: an automatic genome annotation and pathway reconstruction server.KAAS：一个自动基因组注释和通路重建服务器。
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Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).利用EST数据库开发和鉴定大麦（Hordeum vulgare L.）基因衍生的SSR标记。
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印度腥黑粉菌（Tilletia indica Mitra）两个单孢子系（PSWKBGH - 1和PSWKBGH - 2）的基因组序列草图

Draft Genome Sequence of Two Monosporidial Lines of the Karnal Bunt Fungus Tilletia indica Mitra (PSWKBGH-1 and PSWKBGH-2).

作者信息

Sharma Pradeep, Tiwari Ratan, Saharan M S, Sharma Indu, Kumar Jitender, Mishra Shefali, Muthusamy Senthilkumar K, Gupta R K, Jaiswal Sarika, Iquebal M A, Angadi U B, Kumar Neeraj, Fatma Samar, Rai Anil, Kumar Dinesh

机构信息

Crop Improvement Division, ICAR-Indian Institute of Wheat and Barley Research, Karnal, India.

Crop Improvement Division, ICAR-Indian Institute of Wheat and Barley Research, Karnal, India

出版信息

Genome Announc. 2016 Sep 15;4(5):e00928-16. doi: 10.1128/genomeA.00928-16.

DOI:10.1128/genomeA.00928-16
PMID:27634992
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5026432/
Abstract

Karnal bunt disease caused by the fungus Tilletia indica Mitra is a serious concern due to strict quarantines affecting international trade of wheat. We announce here the first draft assembly of two monosporidial lines, PSWKBGH-1 and -2, of this fungus, having approximate sizes of 37.46 and 37.21 Mbp, respectively.

摘要

由真菌印度腥黑粉菌（Tilletia indica Mitra）引起的卡纳尔腥黑穗病是一个严重问题，因为严格的检疫措施影响了小麦的国际贸易。我们在此公布该真菌两个单孢子系PSWKBGH - 1和 - 2的首次草图组装，其大小分别约为37.46和37.21兆碱基对。