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用于体外和体内CRISPR/Cas9诱变的核酶介导的gRNA生成

Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis.

作者信息

Lee Raymond Teck Ho, Ng Ashley Shu Mei, Ingham Philip W

机构信息

Developmental and Biomedical Genetics Laboratory, Institute of Molecular and Cell biology, Agency of Science, Technology and Research (A-STAR), Singapore.

Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore.

出版信息

PLoS One. 2016 Nov 10;11(11):e0166020. doi: 10.1371/journal.pone.0166020. eCollection 2016.

Abstract

CRISPR/Cas9 is now regularly used for targeted mutagenesis in a wide variety of systems. Here we report the use of ribozymes for the generation of gRNAs both in vitro and in zebrafish embryos. We show that incorporation of ribozymes increases the types of promoters and number of target sites available for mutagenesis without compromising mutagenesis efficiency. We have tested this by comparing the efficiency of mutagenesis of gRNA constructs with and without ribozymes and also generated a transgenic zebrafish expressing gRNA using a heat shock promoter (RNA polymerase II-dependent promoter) that was able to induce mutagenesis of its target. Our method provides a streamlined approach to test gRNA efficiency as well as increasing the versatility of conditional gene knock out in zebrafish.

摘要

CRISPR/Cas9现在经常用于多种系统中的靶向诱变。在此,我们报告了核酶在体外和斑马鱼胚胎中用于生成向导RNA(gRNA)的情况。我们表明,核酶的掺入增加了可用于诱变的启动子类型和靶位点数量,同时不影响诱变效率。我们通过比较有核酶和无核酶的gRNA构建体的诱变效率进行了测试,还使用热休克启动子(RNA聚合酶II依赖性启动子)生成了表达gRNA的转基因斑马鱼,该启动子能够诱导其靶标的诱变。我们的方法提供了一种简化的方法来测试gRNA效率,同时增加斑马鱼中条件性基因敲除的通用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75bc/5104441/992dc3633fe0/pone.0166020.g001.jpg

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