Corteselli Elizabeth M, Aitken Michael D, Singleton David R
Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, NC 27599-7431, USA.
Int J Syst Evol Microbiol. 2017 Feb;67(2):311-318. doi: 10.1099/ijsem.0.001622. Epub 2017 Mar 16.
A bacterial strain designated Ca6T was isolated from polycyclic aromatic hydrocarbon (PAH)-contaminated soil from the site of a former manufactured gas plant in Charlotte, NC, USA, and linked phylogenetically to the family Rhodocyclaceae of the class Betaproteobacteria. Its 16S rRNA gene sequence was highly similar to globally distributed environmental sequences, including those previously designated 'Pyrene Group 1' demonstrated to grow on the PAHs phenanthrene and pyrene by stable-isotope probing. The most closely related described relative was Sulfuritalea hydrogenivorans strain sk43HT (93.6 % 16S rRNA gene sequence identity). In addition to a limited number of organic acids, Ca6T was capable of growth on the monoaromatic compounds benzene and toluene, and the azaarene carbazole, as sole sources of carbon and energy. Growth on the PAHs phenanthrene and pyrene was also confirmed. Optimal growth was observed aerobically under mesophilic temperature, neutral pH and low salinity conditions. Major fatty acids present included summed feature 3 (C16 : 1ω7c or C16 : 1ω6c) and C16 : 0. The DNA G+C content of the single chromosome was 55.14 mol% as determined by complete genome sequencing. Due to its distinct genetic and physiological properties, strain Ca6T is proposed as a member of a novel genus and species within the family Rhodocyclaceae, for which the name Rugosibacter aromaticivorans gen. nov., sp. nov. is proposed. The type strain of the species is Ca6T (=ATCC TSD-59T=DSM 103039T).
从美国北卡罗来纳州夏洛特市一座前制气厂场地受多环芳烃(PAH)污染的土壤中分离出一株名为Ca6T的细菌菌株,系统发育分析表明它与β-变形菌纲红环菌科相关。其16S rRNA基因序列与全球分布的环境序列高度相似,包括那些先前被指定为“芘组1”的序列,通过稳定同位素探测证明它们能在PAHs菲和芘上生长。描述的最密切相关的相对菌株是嗜氢硫杆菌属菌株sk43HT(16S rRNA基因序列同一性为93.6%)。除了少数有机酸外,Ca6T能够以单环芳烃苯和甲苯以及氮杂芳烃咔唑作为唯一碳源和能源生长。也证实了其在PAHs菲和芘上的生长。在嗜温温度、中性pH和低盐度条件下有氧培养时观察到最佳生长。主要脂肪酸包括总和特征3(C16 : 1ω7c或C16 : 1ω6c)和C16 : 0。通过全基因组测序确定,单条染色体的DNA G+C含量为55.14 mol%。由于其独特的遗传和生理特性,菌株Ca6T被提议作为红环菌科内一个新属和新种的成员,为此提议命名为芳香食菌粗糙杆菌属(Rugosibacter aromaticivorans),新属,新种。该物种的模式菌株是Ca6T(=ATCC TSD-59T=DSM 103039T)。