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基于空间模糊c均值和水平集混合方法的内镜图像中Barrett黏膜分割

Barrett's Mucosa Segmentation in Endoscopic Images Using a Hybrid Method: Spatial Fuzzy c-mean and Level Set.

作者信息

Yousefi-Banaem Hossein, Rabbani Hossein, Adibi Peyman

机构信息

Department of Biomedical Engineering, School of Advanced Technologies in Medicine, Isfahan University of Medical Science, Isfahan, Iran.

Department of Biomedical Engineering, Medical Image and Signal Processing Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.

出版信息

J Med Signals Sens. 2016 Oct-Dec;6(4):231-236.

PMID:28028499
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5156999/
Abstract

Barrett's mucosa is one of the most important diseases in upper gastrointestinal system that caused by gastro-esophagus reflux. If left untreated, the disease will cause distal esophagus and gastric cardia adenocarcinoma. The malignancy risk is very high in short segment Barrett's mucosa. Therefore, lesion area segmentation can improve specialist decision for treatment. In this paper, we proposed a combined fuzzy method with active models for Barrett's mucosa segmentation. In this study, we applied three methods for special area segmentation and determination. For whole disease area segmentation, we applied the hybrid fuzzy based level set method (LSM). Morphological algorithms were used for gastroesophageal junction determination, and we discriminated Barrett's mucosa from break by applying Chan-Vase method. Fuzzy c-mean and LSMs fail to segment this type of medical image due to weak boundaries. In contrast, the full automatic hybrid method with correlation approach that has used in this paper segmented the metaplasia area in the endoscopy image with desirable accuracy. The presented approach omits the manually desired cluster selection step that needed the operator manipulation. Obtained results convinced us that this approach is suitable for esophagus metaplasia segmentation.

摘要

巴雷特黏膜是上消化道系统中由胃食管反流引起的最重要疾病之一。如果不进行治疗,该疾病将导致食管远端和贲门腺癌。短节段巴雷特黏膜的恶性风险非常高。因此,病变区域分割有助于专家做出治疗决策。在本文中,我们提出了一种结合模糊方法和主动模型的巴雷特黏膜分割方法。在本研究中,我们应用了三种方法进行特殊区域的分割和确定。对于整个疾病区域的分割,我们应用了基于混合模糊的水平集方法(LSM)。形态学算法用于确定胃食管交界处,并且我们通过应用Chan-Vase方法将巴雷特黏膜与破损区分开。由于边界模糊,模糊c均值和水平集方法无法分割这类医学图像。相比之下,本文中使用的具有相关方法的全自动混合方法以理想的精度分割了内窥镜图像中的化生区域。所提出的方法省略了需要操作员操作的手动期望聚类选择步骤。获得的结果使我们相信该方法适用于食管化生分割。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/d151a428e4b6/JMSS-6-231-g018.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/3dd0cfaa31dd/JMSS-6-231-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/a36950263cb4/JMSS-6-231-g015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/b6d22310a49e/JMSS-6-231-g017.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/d151a428e4b6/JMSS-6-231-g018.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/3dd0cfaa31dd/JMSS-6-231-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/a36950263cb4/JMSS-6-231-g015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/b6d22310a49e/JMSS-6-231-g017.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/592a/5156999/d151a428e4b6/JMSS-6-231-g018.jpg

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本文引用的文献

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A new kernel-based fuzzy level set method for automated segmentation of medical images in the presence of intensity inhomogeneity.一种基于核的新型模糊水平集方法,用于在存在强度不均匀性的情况下自动分割医学图像。
Comput Math Methods Med. 2014;2014:978373. doi: 10.1155/2014/978373. Epub 2014 Jan 29.
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A fast and robust level set method for image segmentation using fuzzy clustering and lattice Boltzmann method.一种基于模糊聚类和格子玻尔兹曼方法的快速鲁棒图像分割水平集方法。
IEEE Trans Cybern. 2013 Jun;43(3):910-20. doi: 10.1109/TSMCB.2012.2218233. Epub 2012 Oct 11.
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Integrating spatial fuzzy clustering with level set methods for automated medical image segmentation.
利用空间模糊聚类与水平集方法进行医学图像的自动分割。
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Endoscopic definition of esophagogastric junction for diagnosis of Barrett's esophagus: importance of systematic education and training.内镜下胃食管连接部定义用于 Barrett 食管的诊断:系统教育和培训的重要性。
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Endoscopically defined gastroesophageal junction coincides with the anatomical gastroesophageal junction.内镜下定义的胃食管交界与解剖学上的胃食管交界一致。
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Active contours without edges.无边缘活动轮廓。
IEEE Trans Image Process. 2001;10(2):266-77. doi: 10.1109/83.902291.
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The development and validation of an endoscopic grading system for Barrett's esophagus: the Prague C & M criteria.巴雷特食管内镜分级系统的开发与验证:布拉格C&M标准
Gastroenterology. 2006 Nov;131(5):1392-9. doi: 10.1053/j.gastro.2006.08.032. Epub 2006 Aug 16.
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Fuzzy c-means clustering with spatial information for image segmentation.用于图像分割的带空间信息的模糊c均值聚类
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Inter- and intra-observer variability in the measurement of length at endoscopy: Implications for the measurement of Barrett's esophagus.内镜检查时长度测量的观察者间和观察者内变异性:对巴雷特食管测量的影响。
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