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从国际空间站环境表面分离出的生物安全2级机会致病菌的基因组序列草图

Draft Genome Sequences of Biosafety Level 2 Opportunistic Pathogens Isolated from the Environmental Surfaces of the International Space Station.

作者信息

Checinska Sielaff Aleksandra, Singh Nitin K, Allen Jonathan E, Thissen James, Jaing Crystal, Venkateswaran Kasthuri

机构信息

Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA.

Lawrence Livermore National Laboratory, Livermore, California, USA.

出版信息

Genome Announc. 2016 Dec 29;4(6):e01263-16. doi: 10.1128/genomeA.01263-16.

DOI:10.1128/genomeA.01263-16
PMID:28034853
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5201052/
Abstract

The draft genome sequences of 20 biosafety level 2 (BSL-2) opportunistic pathogens isolated from the environmental surfaces of the International Space Station (ISS) were presented. These genomic sequences will help in understanding the influence of microgravity on the pathogenicity and virulence of these strains when compared with Earth strains.

摘要

本文展示了从国际空间站(ISS)环境表面分离出的20种生物安全2级(BSL-2)机会致病菌的基因组序列草图。与地球上的菌株相比,这些基因组序列将有助于了解微重力对这些菌株致病性和毒力的影响。

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本文引用的文献

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Microbiological and molecular characterization of Staphylococcus hominis isolates from blood.人葡萄球菌血液分离株的微生物学和分子特征。
PLoS One. 2013 Apr 9;8(4):e61161. doi: 10.1371/journal.pone.0061161. Print 2013.
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An integrated pipeline for de novo assembly of microbial genomes.用于从头组装微生物基因组的集成管道。
PLoS One. 2012;7(9):e42304. doi: 10.1371/journal.pone.0042304. Epub 2012 Sep 13.
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Enterobacter cloacae complex: clinical impact and emerging antibiotic resistance.阴沟肠杆菌复合体:临床影响与新兴抗生素耐药性。
Future Microbiol. 2012 Jul;7(7):887-902. doi: 10.2217/fmb.12.61.
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Staphylococcus haemolyticus as an important hospital pathogen and carrier of methicillin resistance genes.溶血葡萄球菌作为一种重要的医院病原体和耐甲氧西林基因的携带者。
J Clin Microbiol. 2012 Jan;50(1):166-8. doi: 10.1128/JCM.05563-11. Epub 2011 Oct 5.
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Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU).不动杆菌-鲍曼不动杆菌复合体的基因表型特征及新种命名:醋酸钙不动杆菌(原名:基因组种 3)和医院不动杆菌(原名:基因组种 13TU)。
Res Microbiol. 2011 May;162(4):393-404. doi: 10.1016/j.resmic.2011.02.006. Epub 2011 Feb 12.
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Emended description of the genus Pantoea, description of four species from human clinical samples, Pantoea septica sp. nov., Pantoea eucrina sp. nov., Pantoea brenneri sp. nov. and Pantoea conspicua sp. nov., and transfer of Pectobacterium cypripedii (Hori 1911) Brenner et al. 1973 emend. Hauben et al. 1998 to the genus as Pantoea cypripedii comb. nov.肠杆菌属的修订说明,来自人类临床样本的四种新种的描述,即肠炎泛菌、浅黄泛菌、布伦纳泛菌和醒目泛菌,以及将野牡丹葡萄座腔菌(Hori 1911)Brenner 等人 1973 年修正。Hauben 等人 1998 年更名为肠杆菌属作为野牡丹葡萄座腔菌复合新种。
Int J Syst Evol Microbiol. 2010 Oct;60(Pt 10):2430-2440. doi: 10.1099/ijs.0.017301-0. Epub 2009 Nov 27.
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Genetic diversity and ecological success of Staphylococcus aureus strains colonizing humans.定殖于人类的金黄色葡萄球菌菌株的遗传多样性与生态适应性
Appl Environ Microbiol. 2009 Jan;75(1):175-83. doi: 10.1128/AEM.01860-08. Epub 2008 Oct 31.
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The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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A new class of genetic element, staphylococcus cassette chromosome mec, encodes methicillin resistance in Staphylococcus aureus.一类新的遗传元件,葡萄球菌盒式染色体mec,编码金黄色葡萄球菌中的耐甲氧西林特性。
Antimicrob Agents Chemother. 2000 Jun;44(6):1549-55. doi: 10.1128/AAC.44.6.1549-1555.2000.
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Staphylococcus aureus: a well-armed pathogen.金黄色葡萄球菌:一种装备精良的病原体。
Clin Infect Dis. 1998 May;26(5):1179-81. doi: 10.1086/520289.