Cui Li, Rui Changhui, Yang Daibin, Wang Zhenying, Yuan Huizhu
Key Laboratory of Integrated Pest Management in Crops, Ministry of Agriculture, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, People's Republic of China.
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, People's Republic of China.
BMC Genomics. 2017 Jan 5;18(1):20. doi: 10.1186/s12864-016-3431-6.
The Asian corn borer (ACB), Ostrinia furnacalis (Guenée), has become the most damaging insect pest of corn in Asia. However, the lack of genome or transcriptome information heavily hinders our further understanding of ACB in every aspect at a molecular level and on a genome-wide scale. Here, we used the Ion Torrent Personal Genome Machine (PGM) Sequencer to explore the ACB transcriptome and to identify relevant genes in response to flubendiamide, showing high selective activity against ACB.
We obtained 35,430 unigenes, with an average length of 716 bp, representing a dramatic expansion of existing cDNA sequences available for ACB. These sequences were annotated with Non-redundant Protein (Nr), Gene Ontology (GO), Clusters of Orthologous Groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) to better understand their functions. A total of 31 cytochrome P450 monooxygenases (P450s), 27 carboxyl/cholinesterases (CCEs) and 19 glutathione S-transferases (GSTs) were manually curated to construct phylogenetic trees, and 25 unigenes encoding target proteins (acetylcholinesterase, nicotinic acetylcholine receptor, gamma-aminobutyric acid receptor, glutamate-gated chloride channel, voltage-gated sodium channel and ryanodine receptor) were identified. In addition, we compared and validated the differentially expressed unigenes upon flubendiamide treatment, revealing that the genes for detoxification enzymes (P450s and esterase), calcium signaling pathways and muscle control pathways (twitchin and tropomyosin), immunoglobulin (hemolin), chemosensory protein and heat shock protein 70 were significantly overexpressed in response to flubendiamide, while the genes for cuticular protein, protease and oxidoreductase showed much lower expression levels.
The obtained transcriptome information provides large genomic resources available for further studies of ACB. The differentially expressed gene data will elucidate the molecular mechanisms of ACB in response to the novel diamide insecticide, flubendiamide. In particular, these findings will facilitate the identification of the genes involved in insecticide resistance and the development of new compounds to control the ACB.
亚洲玉米螟(Ostrinia furnacalis (Guenée))已成为亚洲玉米最具破坏力的害虫。然而,缺乏基因组或转录组信息严重阻碍了我们在分子水平和全基因组范围内从各个方面进一步了解亚洲玉米螟。在此,我们使用离子激流个人基因组测序仪(PGM)来探索亚洲玉米螟转录组,并鉴定与氟苯虫酰胺响应相关的基因,氟苯虫酰胺对亚洲玉米螟具有高选择性活性。
我们获得了35430个单基因,平均长度为716 bp,这代表了亚洲玉米螟现有cDNA序列的显著扩展。这些序列用非冗余蛋白质(Nr)、基因本体论(GO)、直系同源簇(COG)和京都基因与基因组百科全书(KEGG)进行注释,以更好地了解它们的功能。总共手动挑选了31种细胞色素P450单加氧酶(P450s)、27种羧酸酯酶/胆碱酯酶(CCEs)和19种谷胱甘肽S - 转移酶(GSTs)来构建系统发育树,并鉴定了25个编码靶标蛋白(乙酰胆碱酯酶、烟碱型乙酰胆碱受体、γ - 氨基丁酸受体、谷氨酸门控氯离子通道、电压门控钠通道和兰尼碱受体)的单基因。此外,我们比较并验证了氟苯虫酰胺处理后差异表达的单基因,发现解毒酶(P450s和酯酶)、钙信号通路和肌肉控制通路(肌动蛋白结合蛋白和原肌球蛋白)、免疫球蛋白(血淋巴蛋白)、化学感受蛋白和热休克蛋白70的基因在氟苯虫酰胺处理后显著上调,而表皮蛋白、蛋白酶和氧化还原酶的基因表达水平则低得多。
获得的转录组信息为亚洲玉米螟的进一步研究提供了大量基因组资源。差异表达基因数据将阐明亚洲玉米螟对新型双酰胺杀虫剂氟苯虫酰胺响应的分子机制。特别是,这些发现将有助于鉴定参与抗药性的基因以及开发控制亚洲玉米螟的新化合物。