Prasad Samiksha, Xu Jin, Zhang Yunzeng, Wang Nian
Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences, University of Florida, Lake Alfred FL, USA.
Front Microbiol. 2016 Dec 20;7:1989. doi: 10.3389/fmicb.2016.01989. eCollection 2016.
Citrus Huanglongbing (HLB) is the most destructive citrus disease worldwide. HLB is associated with three species of the phloem-limited, gram-negative, fastidious α-proteobacteria: Liberibacter asiaticus (Las), L. americanus (Lam), and L. africanus (Laf) with Las being the most widespread species. Las has not been cultured in artificial media, which has greatly hampered our efforts to understand its virulence mechanisms. Las contains a complete Sec-translocon, which has been suggested to transport Las proteins including virulence factors into the extracytoplasmic milieu. In this study, we characterized the Sec-translocon dependent, signal peptide containing extracytoplasmic proteins of Las. A total of 166 proteins of Las-psy62 strain were predicted to contain signal peptides targeting them out of the cell cytoplasm via the Sec-translocon using LipoP, SigalP 3.0, SignalP 4.1, and Phobius. We also predicated SP containing extracytoplasmic proteins for Las-gxpsy and Las-Ishi-1, Lam, Laf, L. solanacearum (Lso), and (Lcr). For experimental validation of the predicted extracytoplasmic proteins, based alkaline phosphatase (PhoA) gene fusion assays were conducted. A total of 86 out of the 166 predicted Las proteins were experimentally validated to contain signal peptides. Additionally, Las-psy62 (CLIBASIA_04190), the gene encodes signal peptidase I, was able to partially complement the amber mutant of of . This work will contribute to the identification of Sec-translocon dependent effector proteins of Las, which might be involved in virulence of Las.
柑橘黄龙病(HLB)是全球最具破坏性的柑橘病害。HLB与三种韧皮部受限、革兰氏阴性、苛求性α-变形菌有关:亚洲韧皮杆菌(Las)、美洲韧皮杆菌(Lam)和非洲韧皮杆菌(Laf),其中Las是分布最广的物种。Las尚未在人工培养基中培养,这极大地阻碍了我们对其致病机制的研究。Las含有完整的Sec转运体,有人认为它能将包括致病因子在内的Las蛋白转运到细胞外环境中。在本研究中,我们对Las的依赖Sec转运体、含有信号肽的细胞外蛋白进行了表征。使用LipoP、SigalP 3.0、SignalP 4.1和Phobius软件,预测Las-psy62菌株共有166种蛋白质含有信号肽,可通过Sec转运体将它们靶向转运出细胞质。我们还预测了Las-gxpsy、Las-Ishi-1、Lam、Laf、茄科韧皮杆菌(Lso)和胡萝卜软腐欧文氏菌(Lcr)含有信号肽的细胞外蛋白。为了对预测的细胞外蛋白进行实验验证,进行了基于碱性磷酸酶(PhoA)基因融合的分析。在166种预测的Las蛋白中,共有86种经实验验证含有信号肽。此外,Las-psy62(CLIBASIA_04190)基因编码信号肽酶I,它能够部分互补大肠杆菌的琥珀突变体。这项工作将有助于鉴定Las依赖Sec转运体的效应蛋白,这些蛋白可能参与Las的致病过程。