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二倍体森林草莓中TCP转录因子的鉴定与转录分析

Identification and Transcript Analysis of the TCP Transcription Factors in the Diploid Woodland Strawberry .

作者信息

Wei Wei, Hu Yang, Cui Meng-Yuan, Han Yong-Tao, Gao Kuan, Feng Jia-Yue

机构信息

State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F UniversityShaanxi, China; Key Laboratory of Protected Horticulture Engineering in Northwest China, Ministry of AgricultureShaanxi, China.

State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University Shaanxi, China.

出版信息

Front Plant Sci. 2016 Dec 22;7:1937. doi: 10.3389/fpls.2016.01937. eCollection 2016.

DOI:10.3389/fpls.2016.01937
PMID:28066489
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5177655/
Abstract

Plant-specific TEOSINTE BRANCHED 1, CYCLOIDEA, and PROLIFERATING CELL FACTORS (TCP) transcription factors play versatile functions in multiple processes of plant growth and development. However, no systematic study has been performed in strawberry. In this study, 19 genes were identified in the diploid woodland strawberry () accession Heilongjiang-3. Phylogenetic analysis suggested that the genes were classified into two main classes, with the second class further divided into two subclasses, which was supported by the exon-intron organizations and the conserved motif structures. Promoter analysis revealed various -acting elements related to growth and development, hormone and/or stress responses. We analyzed gene transcript accumulation patterns in different tissues and fruit developmental stages. Among them, 12 genes exhibited distinct tissue-specific transcript accumulation patterns. Eleven genes were down-regulated in different fruit developmental stages, while five genes were up-regulated. Transcripts of genes also varied with different subcultural propagation periods and were induced by hormone treatments and biotic and abiotic stresses. Subcellular localization analysis showed that six FvTCP-GFP fusion proteins showed distinct localizations in mesophyll protoplasts. Notably, transient over-expression of in strawberry fruits dramatically affected the expression of a series of genes implicated in fruit development and ripening. Taken together, the present study may provide the basis for functional studies to reveal the role of this gene famil in strawberry growth and development.

摘要

植物特有的玉米分枝1、Cycloidea和增殖细胞因子(TCP)转录因子在植物生长发育的多个过程中发挥着多种功能。然而,尚未在草莓中进行系统研究。在本研究中,在二倍体森林草莓()黑龙江-3种质中鉴定出19个基因。系统发育分析表明,这些基因分为两个主要类别,第二类进一步分为两个亚类,这得到了外显子-内含子组织和保守基序结构的支持。启动子分析揭示了与生长发育、激素和/或应激反应相关的各种顺式作用元件。我们分析了不同组织和果实发育阶段的基因转录本积累模式。其中,12个基因表现出明显的组织特异性转录本积累模式。11个基因在不同果实发育阶段下调,而5个基因上调。基因转录本也随不同的继代繁殖时期而变化,并受到激素处理以及生物和非生物胁迫的诱导。亚细胞定位分析表明,六种FvTCP-GFP融合蛋白在叶肉原生质体中表现出不同的定位。值得注意的是,在草莓果实中瞬时过表达显著影响了一系列与果实发育和成熟相关基因的表达。综上所述,本研究可能为揭示该基因家族在草莓生长发育中的作用的功能研究提供基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/88a9/5177655/8d6d717b3eba/fpls-07-01937-g010.jpg
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