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草地黄杆菌属,新属,新种:从温带草原土壤中分离出的酸杆菌门第6亚群新成员。

Luteitalea pratensis gen. nov., sp. nov. a new member of subdivision 6 Acidobacteria isolated from temperate grassland soil.

作者信息

Vieira Selma, Luckner Manja, Wanner Gerhard, Overmann Jörg

机构信息

Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.

Department of Biology I, Biozentrum Ludwig Maximilian University of Munich, Großhaderner Str. 2, 82152, Planegg-Martinsried, Germany.

出版信息

Int J Syst Evol Microbiol. 2017 May;67(5):1408-1414. doi: 10.1099/ijsem.0.001827. Epub 2017 Jun 5.

Abstract

Albeit being widespread and abundant in soils worldwide, bacteria of the phylum Acidobacteria have remained grossly understudied due to difficulties in their cultivation and isolation. To date, only 48 species have been validly described, including a single member of the phylogenetically diverse Acidobacteria subdivision 6. Here, we report the polyphasic characterization of strain HEG_-6_39T, a novel representative of Acidobacteria subdivision 6 isolated from a grassland soil in Thuringia, Germany. Cells of HEG_-6_39T are Gram-stain-negative, non-motile, non-spore-forming, non-capsulated short rods that form small dark yellow colonies. This slow growing bacterium is psychrotolerant and grows between 0 and 36 °C. It displays a narrower pH tolerance (5.3-8.3) than most acidobacteria. The strain is an aerobe that grows chemo-organotrophically utilizing mostly sugars and proteinaceous substrates such as peptone, yeast extract, casein hydrolysate and casamino acids as substrates. Diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol and two unknown phospholipids are identified as polar lipids. Major fatty acids are iso-C15 : 0, summed feature 3 (C16 : 1ω6c/C16 : 1ω7c), C18 : 1ω9c and iso-C17 : 1ω9c. The major respiratory quinone is MK-8. The G+C content of the genomic DNA is 64.7 mol%. 16S rRNA gene sequence analysis indicated that this bacterium was related to Vicinamibacter silvestris Ac_5_C6T with 93.6 % sequence similarity. Based on the present taxonomic characterization, strain HEG_-6_39T represents a new species of a novel genus for which the name Luteitalea pratensis gen. nov., sp. nov., is proposed. The type strain of the type species is HEG_-6_39T (=DSM 100886T=KCTC 52215T).

摘要

尽管酸杆菌门细菌在全球土壤中广泛存在且数量丰富,但由于其培养和分离困难,对其研究仍非常不足。迄今为止,仅有48个种得到有效描述,其中包括系统发育多样的酸杆菌亚群6中的一个成员。在此,我们报告了菌株HEG_-6_39T的多相特征,该菌株是从德国图林根州的草地土壤中分离出的酸杆菌亚群6的一个新代表。HEG_-6_39T的细胞革兰氏染色阴性,不运动,不产芽孢,无荚膜,为短杆状,形成小的深黄色菌落。这种生长缓慢的细菌具有耐冷性,在0至36°C之间生长。它的pH耐受范围(5.3 - 8.3)比大多数酸杆菌更窄。该菌株是需氧菌,以化学有机营养方式生长,主要利用糖类和蛋白质类底物,如蛋白胨、酵母提取物、酪蛋白水解物和氨基酸作为底物。二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、磷脂酰甘油和两种未知磷脂被鉴定为极性脂质。主要脂肪酸为异-C15 : 0、特征性总和3(C16 : 1ω6c/C16 : 1ω7c)、C18 : 1ω9c和异-C17 : 1ω9c。主要呼吸醌为MK-8。基因组DNA的G+C含量为64.7 mol%。16S rRNA基因序列分析表明,该细菌与森林邻氨基苯甲酸盐杆菌Ac_5_C6T相关,序列相似性为93.6 %。基于目前的分类学特征,菌株HEG_-6_39T代表一个新属的新种,为此提议命名为草地黄色杆菌属(Luteitalea pratensis),新属,新种。模式种的模式菌株为HEG_-6_39T(=DSM 100886T=KCTC 52215T)。

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