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中国内蒙古乌兰察布分离的人源[具体内容缺失,推测可能是某种病原体或生物样本等]的多位点可变数目串联重复序列(MLVA)基因分型特征

MLVA Genotyping Characteristics of Human Isolated from Ulanqab of Inner Mongolia, China.

作者信息

Liu Zhi-Guo, Di Dong-Dong, Wang Miao, Liu Ri-Hong, Zhao Hong-Yan, Piao Dong-Ri, Tian Guo-Zhong, Fan Wei-Xing, Jiang Hai, Cui Bu-Yun, Xia Xian-Zhu

机构信息

College of Veterinary Medical Inner Mongolia Agriculture UniversityHohhot, China; Ulanqab Centre for Endemic Disease Prevention and Control, Health and Family Planning Commission of UlanqabJining, China.

Laboratory of Zoonoses, China Animal Health and Epidemiology Center MOA, Qingdao, China.

出版信息

Front Microbiol. 2017 Jan 18;8:6. doi: 10.3389/fmicb.2017.00006. eCollection 2017.

Abstract

Brucellosis is a serious public health problem in Ulanqab, which is a region located in the middle of the Inner Mongolia Autonomous Region adjacent to Shanxi and Hebei provinces. The disease is prevalent in both the latter provinces and Ulanqab with the highest prevalence of brucellosis occurring in Inner Mongolia. The MLVA-16 scheme is a genotyping tool for assessing genetic diversity and relationships among isolates. Moreover, this genotyping tool can also be applied to epidemiological trace-back investigations. This study reports the occurrence of at least two biovars (1 and 3) in Ulanqab, encompassing 22 and 94 isolates, respectively. biovar 3 was the predominant biovar in the area examined. Panel 1 (MLVA-8) identified three genotypes (42, 63, and 114), with genotype 42 ( = 101) representing 87% of the tested strains. MLVA-11 identified eight genotypes (116, 111, 297, 291, and 342-345) from 116 of the analyzed isolates. All of these isolates were identified as belonging to the East Mediterranean group. Genotype 116 ( = 94) was the predominant genotype and represented 81% of the isolates. The isolates pertaining to this genotype were distributed throughout most of Ulanqab and neighboring regions. The MLVA-16 scheme showed the presence of 69 genotypes, with 46 genotypes being represented by single isolates. This analysis revealed that Ulanqab brucellosis cases had epidemiologically unrelated and sporadic characteristics. The remaining 23 genotypes were shared (between a total of 70 isolates) with each genotype being represented by two to eight isolates. These data indicate that these cases were epidemiologically related. MLVA genotyping confirmed the occurrence of a multipoint outbreak epidemic and intrafamilial brucellosis. Extensive genotype-sharing events were observed among isolates from different regions of Ulanqab and from other provinces of China. These findings suggest either a lack of control of animal movement between different regions or the circulation of contaminated animal products in the market. Our study is the first comprehensive genotyping and genetic analysis of in Ulanqab. We believe that this study will help to improve the effectiveness of brucellosis control programs.

摘要

布鲁氏菌病是乌兰察布市一个严重的公共卫生问题,乌兰察布市位于内蒙古自治区中部,与山西省和河北省相邻。这种疾病在山西省、河北省以及乌兰察布市都很流行,其中内蒙古的布鲁氏菌病患病率最高。MLVA-16分型方案是一种用于评估分离株之间遗传多样性和关系的基因分型工具。此外,这种基因分型工具还可应用于流行病学溯源调查。本研究报告了乌兰察布市至少存在两种生物变种(生物变种1和生物变种3),分别包含22株和94株分离株。生物变种3是所检测地区的主要生物变种。第一组(MLVA-8)鉴定出三种基因型(42、63和114),其中基因型42(n = 101)占检测菌株的87%。MLVA-11从116株分析的分离株中鉴定出八种基因型(116、111、297、291和342 - 345)。所有这些分离株均被鉴定为属于东地中海组。基因型116(n = 94)是主要基因型,占分离株的81%。属于该基因型的分离株分布在乌兰察布市的大部分地区以及周边地区。MLVA-16分型方案显示存在69种基因型,其中46种基因型仅由单个分离株代表。该分析表明乌兰察布市的布鲁氏菌病病例具有流行病学上不相关和散发的特征。其余23种基因型是共享的(共涉及70株分离株),每种基因型由2至8株分离株代表。这些数据表明这些病例在流行病学上相关。MLVA基因分型证实了多点暴发疫情和家庭内布鲁氏菌病的发生。在乌兰察布市不同地区以及中国其他省份的分离株中观察到广泛的基因型共享事件。这些发现表明要么不同地区之间动物流动控制不力,要么市场上存在受污染动物产品的流通。我们的研究是对乌兰察布市布鲁氏菌病进行的首次全面基因分型和遗传分析。我们相信这项研究将有助于提高布鲁氏菌病防控项目的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47f5/5241320/a4d251faff73/fmicb-08-00006-g0001.jpg

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