Glasser Nathaniel R, Wang Benjamin X, Hoy Julie A, Newman Dianne K
From the Divisions of Biology and Biological Engineering and.
From the Divisions of Biology and Biological Engineering and
J Biol Chem. 2017 Mar 31;292(13):5593-5607. doi: 10.1074/jbc.M116.772848. Epub 2017 Feb 7.
Phenazines are a class of redox-active molecules produced by diverse bacteria and archaea. Many of the biological functions of phenazines, such as mediating signaling, iron acquisition, and redox homeostasis, derive from their redox activity. Although prior studies have focused on extracellular phenazine oxidation by oxygen and iron, here we report a search for reductants and catalysts of intracellular phenazine reduction in Enzymatic assays in cell-free lysate, together with crude fractionation and chemical inhibition, indicate that contains multiple enzymes that catalyze the reduction of the endogenous phenazines pyocyanin and phenazine-1-carboxylic acid in both cytosolic and membrane fractions. We used chemical inhibitors to target general enzyme classes and found that an inhibitor of flavoproteins and heme-containing proteins, diphenyleneiodonium, effectively inhibited phenazine reduction , suggesting that most phenazine reduction derives from these enzymes. Using natively purified proteins, we demonstrate that the pyruvate and α-ketoglutarate dehydrogenase complexes directly catalyze phenazine reduction with pyruvate or α-ketoglutarate as electron donors. Both complexes transfer electrons to phenazines through the common subunit dihydrolipoamide dehydrogenase, a flavoprotein encoded by the gene Although we were unable to co-crystallize LpdG with an endogenous phenazine, we report its X-ray crystal structure in the apo-form (refined to 1.35 Å), bound to NAD (1.45 Å), and bound to NADH (1.79 Å). In contrast to the notion that phenazines support intracellular redox homeostasis by oxidizing NADH, our work suggests that phenazines may substitute for NAD in LpdG and other enzymes, achieving the same end by a different mechanism.
吩嗪是一类由多种细菌和古细菌产生的具有氧化还原活性的分子。吩嗪的许多生物学功能,如介导信号传导、铁摄取和氧化还原稳态,都源于它们的氧化还原活性。尽管先前的研究集中在氧气和铁对细胞外吩嗪的氧化作用上,但在此我们报告了对细胞内吩嗪还原的还原剂和催化剂的研究。无细胞裂解物中的酶促测定,以及粗分级分离和化学抑制表明,[具体细菌名称未给出]含有多种酶,这些酶在细胞质和膜部分都能催化内源性吩嗪绿脓菌素和吩嗪 -1- 羧酸的还原。我们使用化学抑制剂靶向一般酶类,发现黄素蛋白和含血红素蛋白的抑制剂二苯基碘鎓有效地抑制了吩嗪的还原,这表明大多数吩嗪还原源于这些酶。使用天然纯化的蛋白质,我们证明丙酮酸和α - 酮戊二酸脱氢酶复合物直接以丙酮酸或α - 酮戊二酸作为电子供体催化吩嗪还原。这两种复合物都通过共同亚基二氢硫辛酰胺脱氢酶将电子转移到吩嗪上,二氢硫辛酰胺脱氢酶是由基因[具体基因名称未给出]编码的黄素蛋白。尽管我们无法使LpdG与内源性吩嗪共结晶,但我们报告了其无配体形式(精制到1.35 Å)、与NAD结合(1.45 Å)和与NADH结合(1.79 Å)的X射线晶体结构。与吩嗪通过氧化NADH来支持细胞内氧化还原稳态的观点相反,我们的工作表明吩嗪可能在LpdG和其他酶中替代NAD,通过不同的机制达到相同的目的。