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桃病毒D的全核苷酸序列及基因组结构,桃病毒D可能是马拉病毒属的一个新成员。

Complete nucleotide sequence and genome organization of peach virus D, a putative new member of the genus Marafivirus.

作者信息

Igori Davaajargal, Lim Seungmo, Baek Dasom, Kim San Yeong, Seo Euncheol, Cho In-Sook, Choi Gug-Seoun, Lim Hyoun-Sub, Moon Jae Sun

机构信息

Biosystems and Bioengineering Program, University of Science and Technology, Daejeon, 34113, Republic of Korea.

Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.

出版信息

Arch Virol. 2017 Jun;162(6):1769-1772. doi: 10.1007/s00705-017-3255-y. Epub 2017 Feb 10.

Abstract

The complete nucleotide sequence of peach virus D (PeVD) from Prunus persica was determined. The PeVD genome consists of 6,612 nucleotides excluding the 3' poly(A) tail and contains a single open reading frame coding for a polyprotein of 227 kDa. Sequence comparisons and phylogenetic analysis revealed that PeVD is most closely related to viruses in the genus Marafivirus, family Tymoviridae. The complete nucleotide and CP amino acid sequences of PeVD were most similar (51.1-57.8% and 32.2-48.0%, respectively) to members of the genus Marafivirus, suggesting that PeVD is a new member of this genus.

摘要

测定了来自桃(Prunus persica)的桃病毒D(PeVD)的完整核苷酸序列。PeVD基因组由6612个核苷酸组成(不包括3' 多聚腺苷酸尾),包含一个单一的开放阅读框,编码一个227 kDa的多聚蛋白。序列比较和系统发育分析表明,PeVD与番茄丛矮病毒科马拉病毒属中的病毒关系最为密切。PeVD的完整核苷酸序列和外壳蛋白氨基酸序列与马拉病毒属成员最为相似(分别为51.1 - 57.8%和32.2 - 48.0%),这表明PeVD是该属的一个新成员。

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