Miao Ying-Ying, Liu Juan, Zhu Jie, Tao Yan-Ling, Zhang Jia-An, Luo Dan, Zhou Bing-Rong
Department of Dermatology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Department of Dermatology, The First Affiliated Hospital of Nanjing University of TCM, Nanjing, Jiangsu 210029, China.
Biomed Res Int. 2017;2017:2957941. doi: 10.1155/2017/2957941. Epub 2017 Feb 7.
. This study was aimed at analyzing the expressions of long noncoding RNAs (lncRNAs) in Botulinum Toxin Type A (BoNTA) treated human dermal fibroblasts (HDFs) in vitro. . We used RNA sequencing to characterize the lncRNAs and mRNAs transcriptome in the control and BoNTA treated group, in conjunction with application of GO (gene ontology) analysis and KEGG (kyoto encyclopedia of genes and genomes) analysis to delineate the alterations in gene expression. We also obtained quantitative real time polymerase chain reaction (qRT-PCR) to confirm some differentially expressed genes. . Numerous differentially expressed genes were observed by microarrays between the two groups. qRT-PCR confirmed the changes of six lncRNAs (RP11-517C16.2-001, FR271872, LOC283352, RP11-401E9.3, FGFR3P, and XXbac-BPG16N22.5) and nine mRNAs (NOS2, C13orf15, FOS, FCN2, SPINT1, PLAC8, BIRC5, NOS2, and COL19A1). Farther studies indicated that the downregulating effect of BoNTA on the expression of FGFR3P was time-related and the dosage of BoNTA at a range from 2.5 U/10 cells to 7.5 U/10 cells increased the expression of FGFR3P and COL19A1 in HDFs as well. . The expression profiling of lncRNAs was visibly changed in BoNTA treated HDFs. Further studies should focus on several lncRNAs to investigate their functions in BoNTA treated HDFs and the underlying mechanisms.
本研究旨在分析A型肉毒杆菌毒素(BoNTA)体外处理人皮肤成纤维细胞(HDFs)后长链非编码RNA(lncRNAs)的表达情况。我们运用RNA测序对对照组和BoNTA处理组的lncRNAs和mRNAs转录组进行表征,并结合基因本体论(GO)分析和京都基因与基因组百科全书(KEGG)分析来描绘基因表达的变化。我们还通过定量实时聚合酶链反应(qRT-PCR)来确认一些差异表达基因。通过微阵列观察到两组之间存在众多差异表达基因。qRT-PCR证实了6种lncRNAs(RP11-517C16.2-001、FR271872、LOC283352、RP11-401E9.3、FGFR3P和XXbac-BPG16N22.5)和9种mRNAs(NOS2、C13orf15、FOS、FCN2、SPINT1、PLAC8、BIRC5、NOS2和COL19A1)的变化。进一步研究表明,BoNTA对FGFR3P表达的下调作用与时间相关,并且在2.5 U/10细胞至7.5 U/10细胞范围内的BoNTA剂量也增加了HDFs中FGFR3P和COL19A1的表达。在BoNTA处理的HDFs中,lncRNAs的表达谱明显改变。进一步的研究应聚焦于几种lncRNAs,以研究它们在BoNTA处理的HDFs中的功能及潜在机制。