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扩展光合自养生物的遗传密码。

Expanding the Genetic Code of a Photoautotrophic Organism.

作者信息

Chemla Yonatan, Friedman Mor, Heltberg Mathias, Bakhrat Anna, Nagar Elad, Schwarz Rakefet, Jensen Mogens Høgh, Alfonta Lital

机构信息

Department of Life Sciences and Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev , Beer-Sheva 84105, Israel.

Niels Bohr Institute, University of Copenhagen , Blegdamsvej 17, 2100 Copenhagen, Denmark.

出版信息

Biochemistry. 2017 Apr 25;56(16):2161-2165. doi: 10.1021/acs.biochem.7b00131. Epub 2017 Apr 12.

Abstract

The photoautotrophic freshwater cyanobacterium Synechococcus elongatus is widely used as a chassis for biotechnological applications as well as a photosynthetic bacterial model. In this study, a method for expanding the genetic code of this cyanobacterium has been established, thereby allowing the incorporation of unnatural amino acids into proteins. This was achieved through UAG stop codon suppression, using an archaeal pyrrolysyl orthogonal translation system. We demonstrate incorporation of unnatural amino acids into green fluorescent protein with 20 ± 3.5% suppression efficiency. The introduced components were shown to be orthogonal to the host translational machinery. In addition, we observed that no significant growth impairment resulted from the integration of the system. To interpret the observations, we modeled and investigated the competition over the UAG codon between release factor 1 and pyl-tRNA. On the basis of the model results, and the fact that 39.6% of the stop codons in the S. elongatus genome are UAG stop codons, the suppression efficiency in S. elongatus is unexpectedly high. The reason for this unexpected suppression efficiency has yet to be determined.

摘要

光合自养淡水蓝细菌聚球藻被广泛用作生物技术应用的底盘以及光合细菌模型。在本研究中,已建立了一种扩展这种蓝细菌遗传密码的方法,从而能够将非天然氨基酸掺入蛋白质中。这是通过使用古菌吡咯赖氨酸正交翻译系统抑制UAG终止密码子来实现的。我们证明非天然氨基酸以20±3.5%的抑制效率掺入绿色荧光蛋白中。所引入的组分与宿主翻译机制正交。此外,我们观察到该系统的整合并未导致明显的生长受损。为了解释这些观察结果,我们对释放因子1和吡咯赖氨酸tRNA之间对UAG密码子的竞争进行了建模和研究。基于模型结果以及聚球藻基因组中39.6%的终止密码子是UAG终止密码子这一事实,聚球藻中的抑制效率出乎意料地高。这种意外的抑制效率的原因尚待确定。

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